RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA888821" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA888821 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27908035 27908035 PRJNA888821_P_NODE_45465_length_219_cov_15.136986_g45382_i0 PRJNA888821 45465 219 15.136986 33.14999934 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 42 0.0488   NR NLV46220.1 2030809 g45382 i0 38.6 0.780821917808219 57 23 61.6 2 63 197 237 293 NLV46220.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 171 42 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32490137 32490137 PRJNA888821_P_NODE_42659_length_229_cov_9.801282_g42576_i0 PRJNA888821 42659 229 9.801282 22.44493578 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 87.8 4.27e-18   NR MCC6487533.1 2030809 g42576 i0 53.9 1.99126637554585 76 35 99.6 0 1 228 518 593 MCC6487533.1 DUF4838 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 456 87.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;