RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA888821" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA888821 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27497957 27497957 PRJNA888821_P_NODE_39663_length_240_cov_5.491018_g39580_i0 PRJNA888821 39663 240 5.491018 13.1784432 Raphanus sativus chrysovirus 1 1162393 Viruses Viruses 77.4 2.2e-14   NR YP_009667004.1 1162393 g39580 i0 50 0.85 68 34 85 0 223 20 125 192 YP_009667004.1 putative protease [Raphanus sativus chrysovirus 1] diamond 204 77.4 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus raphani
32616269 32616269 PRJNA888821_P_NODE_25540_length_290_cov_3.576037_g25458_i0 PRJNA888821 25540 290 3.576037 10.3705073 Iflaviridae sp. 1955145 Viruses Viruses 125 1.02e-31   NR XCO48891.1 1955145 g25458 i0 64.8 1.82068965517241 88 31 91 0 266 3 160 247 XCO48891.1 MAG: putative ORF1 protein, partial [Iflaviridae sp.] diamond 528 125 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Iflaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;