RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA888104" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA888104 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29581404 29581404 PRJNA888104_P_NODE_2170_length_643_cov_1.951220_g2103_i0 PRJNA888104 2170 643 1.95122 12.5463446 Pinkberry virus LS 3003837 Viruses Viruses 187 5.009999999999998e-55   NR WBC28387.1 3003837 g2103 i0 47.2 2.99066874027994 214 106 98 5 1 630 84 294 WBC28387.1 replication-associated protein [Pinkberry virus LS07-2018-MD00] diamond 1923 187 1 Viruses               Pinkberry virus LS07-2018-MD00
30245212 30245212 PRJNA888104_P_NODE_19812_length_234_cov_2.072727_g19743_i0 PRJNA888104 19812 234 2.072727 4.85018118 African cichlid piscichuvirus 3065075 Viruses Viruses 79.3 4.31e-15   NR WLN26256.1 3065075 g19743 i0 45.5 0.987179487179487 77 42 98.7 0 233 3 152 228 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 231 79.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
32805110 32805110 PRJNA888104_P_NODE_21840_length_230_cov_1.590062_g21771_i0 PRJNA888104 21840 230 1.590062 3.6571426 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 131 1.69e-33   NR XCM68434.1 3003959 g21771 i0 80.5 1.00434782608696 77 14 99.1 1 1 228 210 286 XCM68434.1 MAG: structural polyprotein [Picornavirales sp.] diamond 231 131 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;