RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA888104" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA888104 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27023793 27023793 PRJNA888104_P_NODE_6622_length_379_cov_1.332258_g6553_i0 PRJNA888104 6622 379 1.332258 5.04925782 Aspergillus pseudocaelatus 1825620 Fungi Fungi 44.3 0.0434   NR KAE8417508.1 1825620 g6553 i0 37.9 0.522427440633245 66 37 49.1 2 190 5 231 296 KAE8417508.1 hypothetical protein BDV36DRAFT_256778 [Aspergillus pseudocaelatus] diamond 198 44.3 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus pseudocaelatus
28894852 28894852 PRJNA888104_P_NODE_21728_length_231_cov_0.888889_g21659_i0 PRJNA888104 21728 231 0.888889 2.05333359 Cordycipitaceae 474943 Fungi Fungi 138 6.6e-36   NR PQK14228.1 176275 g21659 i0 83.1 6 77 13 100 0 1 231 371 447 PQK14228.1 hypothetical protein BB8028_0004g11580 [Beauveria bassiana] diamond 1386 138 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Beauveria Beauveria bassiana
32805109 32805109 PRJNA888104_P_NODE_14500_length_270_cov_1.393035_g14431_i0 PRJNA888104 14500 270 1.393035 3.7611945 Golovinomyces magnicellulatus 62714 Fungi Fungi 50.1 6.72e-5   NR TQS32689.1 62714 g14431 i0 67.6 1.04444444444444 34 11 37.8 0 1 102 25 58 TQS32689.1 hypothetical protein Golomagni_06988 [Golovinomyces magnicellulatus] diamond 282 50.1 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Golovinomyces Golovinomyces magnicellulatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;