contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA888104" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27908017 | 27908017 | PRJNA888104_P_NODE_22045_length_230_cov_0.906832_g21976_i0 | PRJNA888104 | 22045 | 230 | 0.906832 | 2.0857136 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 42.4 | 0.0386 | NR | MCR4686858.1 | 1898203 | g21976 | i0 | 33.3 | 0.9 | 69 | 45 | 90 | 1 | 212 | 6 | 17 | 84 | MCR4686858.1 hemolysin III family protein [Lachnospiraceae bacterium] | diamond | 207 | 42.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 28697844 | 28697844 | PRJNA888104_P_NODE_18187_length_241_cov_1.226744_g18118_i0 | PRJNA888104 | 18187 | 241 | 1.226744 | 2.95645304 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 43.5 | 0.0187 | NR | WP_133427604.1 | 1762 | g18118 | i0 | 47.5 | 0.995850622406639 | 40 | 21 | 49.8 | 0 | 21 | 140 | 176 | 215 | WP_133427604.1 MULTISPECIES: phage baseplate assembly protein V [Mycobacteriaceae] | diamond | 240 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | ||||
| 28950492 | 28950492 | PRJNA888104_P_NODE_19088_length_236_cov_0.874251_g19019_i0 | PRJNA888104 | 19088 | 236 | 0.874251 | 2.06323236 | Leptolyngbyaceae cyanobacterium SM1_3_5 | 2720458 | Bacteria | Bacteria | 131 | 5.6299999999999985e-34 | NR | NJL21289.1 | 2720458 | g19019 | i0 | 88 | 0.953389830508475 | 75 | 9 | 95.3 | 0 | 11 | 235 | 23 | 97 | NJL21289.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein [Leptolyngbyaceae cyanobacterium SM1_3_5] | diamond | 225 | 131 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Leptolyngbyales | Leptolyngbyaceae | Leptolyngbyaceae cyanobacterium SM1_3_5 | ||
| 29305366 | 29305366 | PRJNA888104_P_NODE_23389_length_224_cov_2.677419_g23320_i0 | PRJNA888104 | 23389 | 224 | 2.677419 | 5.99741856 | Actinomycetes | 1760 | Bacteria | Bacteria | 69.7 | 5.63e-12 | NR | WP_263797007.1 | 344163 | g23320 | i0 | 60 | 4.09821428571429 | 60 | 24 | 80.4 | 0 | 209 | 30 | 30 | 89 | WP_263797007.1 phosphotransferase [Microbacterium terricola] | diamond | 918 | 70.1 | 0.994293865905849 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium terricola | ||
| 30308714 | 30308714 | PRJNA888104_P_NODE_22612_length_229_cov_0.912500_g22543_i0 | PRJNA888104 | 22612 | 229 | 0.9125 | 2.089625 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 43.9 | 0.0116 | NR | MBN1178039.1 | 2052143 | g22543 | i0 | 46.7 | 0.589519650655022 | 45 | 23 | 57.6 | 1 | 12 | 143 | 340 | 384 | MBN1178039.1 glycosyltransferase family 2 protein [Anaerolineae bacterium] | diamond | 135 | 43.9 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 31224356 | 31224356 | PRJNA888104_P_NODE_10215_length_315_cov_0.865854_g10146_i0 | PRJNA888104 | 10215 | 315 | 0.865854 | 2.7274401 | Mycobacterium sp. GA-1841 | 1834154 | Bacteria | Bacteria | 44.3 | 0.0193 | NR | WP_076195493.1 | 1834154 | g10146 | i0 | 40.7 | 0.561904761904762 | 59 | 34 | 55.2 | 1 | 176 | 3 | 154 | 212 | WP_076195493.1 TetR/AcrR family transcriptional regulator [Mycobacterium sp. GA-1841] | diamond | 177 | 44.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. GA-1841 | ||
| 31256140 | 31256140 | PRJNA888104_P_NODE_475_length_1232_cov_64.892519_g438_i0 | PRJNA888104 | 475 | 1232 | 64.892519 | 799.47583408 | Virgibacillus sp. 19R1-5 | 2834410 | Bacteria | Bacteria | 242 | 6.089999999999999e-74 | NR | WP_213406776.1 | 2834410 | g438 | i0 | 73.2 | 0.655032467532468 | 269 | 69 | 64.8 | 1 | 2 | 799 | 2 | 270 | WP_213406776.1 hypothetical protein, partial [Virgibacillus sp. 19R1-5] | diamond | 807 | 242 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Virgibacillus | Virgibacillus sp. 19R1-5 | ||
| 31382779 | 31382779 | PRJNA888104_P_NODE_11076_length_304_cov_0.923404_g11007_i0 | PRJNA888104 | 11076 | 304 | 0.923404 | 2.80714816 | SAR202 cluster bacterium | 2030829 | Bacteria | Bacteria | 43.5 | 0.0294 | NR | MDP7225415.1 | 2030829 | g11007 | i0 | 35 | 0.592105263157895 | 60 | 31 | 53.3 | 2 | 50 | 211 | 99 | 156 | MDP7225415.1 NIPSNAP family protein [SAR202 cluster bacterium] | diamond | 180 | 43.5 | 1 | Bacteria | SAR202 cluster | Bacillati | Chloroflexota | Dehalococcoidia | SAR202 cluster bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;