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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA886442" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 14 ✖

tax_kingdom 1

bioproject 1

  • PRJNA886442 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3412589 3412589 PRJNA886442_P_NODE_11043_length_251_cov_1.544944_g10879_i0 PRJNA886442 11043 251 1.544944 3.87780944 Myxococcia 32015 Bacteria Bacteria 61.2 9.94e-10   NR MBN9167310.1 2026763 g10879 i0 66.7 1.97211155378486 42 14 50.2 0 250 125 81 122 MBN9167310.1 NAD(+) kinase [Myxococcales bacterium] diamond 495 61.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
11065552 11065552 PRJNA886442_P_NODE_9_length_13403_cov_5.153938_g1_i3 PRJNA886442 9 13403 5.153938 690.78231014 Myxococcales bacterium 2026763 Bacteria Bacteria 388 9.839999999999998e-118   NR RJO66932.1 2026763 g1 i3 63.6 0.0738640602850108 330 108 7.3 6 5773 6750 6 327 RJO66932.1 MAG: hypothetical protein C4523_10580 [Myxococcales bacterium] diamond 990 388 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
26928924 26928924 PRJNA886442_P_NODE_13222_length_246_cov_0.901734_g13058_i0 PRJNA886442 13222 246 0.901734 2.21826564 Labilithrix sp. 1971228 Bacteria Bacteria 124 3.659999999999999e-31   NR MCW5831902.1 1971228 g13058 i0 70.7 1.85365853658537 82 24 100 0 1 246 301 382 MCW5831902.1 SDR family oxidoreductase [Labilithrix sp.] diamond 456 124 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
27149836 27149836 PRJNA886442_P_NODE_11382_length_251_cov_0.876404_g11218_i0 PRJNA886442 11382 251 0.876404 2.19977404 Labilithrix sp. 1971228 Bacteria Bacteria 147 4.63e-39   NR MBX3225638.1 1971228 g11218 i0 86.7 0.99203187250996006 83 11 99.2 0 2 250 166 248 MBX3225638.1 pyruvate, phosphate dikinase [Labilithrix sp.] diamond 249 147 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
27434920 27434920 PRJNA886442_P_NODE_13543_length_246_cov_0.901734_g13379_i0 PRJNA886442 13543 246 0.901734 2.21826564 Myxococcales bacterium 68-2 2026763 Bacteria Bacteria 102 2.1699999999999994e-24   NR OJY28166.1 1895795 g13379 i0 69.4 0.75609756097561 62 19 75.6 0 243 58 158 219 OJY28166.1 MAG: hypothetical protein BGO98_21730 [Myxococcales bacterium 68-20] diamond 186 102 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium 68-20
28066138 28066138 PRJNA886442_P_NODE_13345_length_246_cov_0.901734_g13181_i0 PRJNA886442 13345 246 0.901734 2.21826564 Labilithrix sp. 1971228 Bacteria Bacteria 61.2 3.72e-9   NR MBX3200493.1 1971228 g13181 i0 50.7 2.59756097560976 71 35 86.6 0 244 32 126 196 MBX3200493.1 hypothetical protein [Labilithrix sp.] diamond 639 61.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29076691 29076691 PRJNA886442_P_NODE_11648_length_250_cov_0.881356_g11484_i0 PRJNA886442 11648 250 0.881356 2.20339 Polyangiaceae bacterium 2268199 Bacteria Bacteria 111 7.190000000000001e-27   NR MFO0658708.1 2268199 g11484 i0 65.1 0.996 83 29 99.6 0 1 249 189 271 MFO0658708.1 phosphopantothenoylcysteine decarboxylase [Polyangiaceae bacterium] diamond 249 111 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29644462 29644462 PRJNA886442_P_NODE_10790_length_252_cov_0.871508_g10626_i0 PRJNA886442 10790 252 0.871508 2.19620016 Labilithrix sp. 1971228 Bacteria Bacteria 102 2.51e-23   NR HSO35440.1 1971228 g10626 i0 71.6 1.5952380952381 67 19 79.8 0 2 202 470 536 HSO35440.1 AgmX/PglI C-terminal domain-containing protein [Labilithrix sp.] diamond 402 102 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
29644474 29644474 PRJNA886442_P_NODE_9750_length_259_cov_1.430108_g9586_i0 PRJNA886442 9750 259 1.430108 3.70397972 Polyangiaceae bacterium 2268199 Bacteria Bacteria 75.1 3.76e-14   NR HMR10672.1 2268199 g9586 i0 53.5 1.74903474903475 71 32 82.2 1 222 10 73 142 HMR10672.1 SDR family NAD(P)-dependent oxidoreductase [Polyangiaceae bacterium] diamond 453 75.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30118534 30118534 PRJNA886442_P_NODE_15072_length_242_cov_0.923077_g14908_i0 PRJNA886442 15072 242 0.923077 2.23384634 Sandaracinaceae bacterium 2510337 Bacteria Bacteria 44.3 0.00503   NR MBK6578172.1 2510337 g14908 i0 37.5 0.892561983471074 72 40 83.1 1 33 233 15 86 MBK6578172.1 hypothetical protein [Sandaracinaceae bacterium] diamond 216 44.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium
30213298 30213298 PRJNA886442_P_NODE_6412_length_308_cov_2.872340_g6248_i0 PRJNA886442 6412 308 2.87234 8.8468072 Labilithrix sp. 1971228 Bacteria Bacteria 82.8 9.29e-18   NR MBX3207856.1 1971228 g6248 i0 43.1 1.60714285714286 116 48 97.4 2 3 302 2 115 MBX3207856.1 hypothetical protein [Labilithrix sp.] diamond 495 82.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
30308708 30308708 PRJNA886442_P_NODE_6992_length_298_cov_1.302222_g6828_i0 PRJNA886442 6992 298 1.302222 3.88062156 Kofleriaceae bacterium 2212474 Bacteria Bacteria 44.3 0.0197   NR MEO6772471.1 2212474 g6828 i0 41.9 0.432885906040268 43 25 43.3 0 104 232 148 190 MEO6772471.1 DUF1266 domain-containing protein [Kofleriaceae bacterium] diamond 129 44.3 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30655700 30655700 PRJNA886442_P_NODE_14093_length_244_cov_0.912281_g13929_i0 PRJNA886442 14093 244 0.912281 2.22596564 Polyangiaceae bacterium 2268199 Bacteria Bacteria 98.2 4.76e-22   NR HXS16031.1 2268199 g13929 i0 67.1 3.45491803278689 70 19 86.1 1 244 35 38 103 HXS16031.1 glycosyltransferase [Polyangiaceae bacterium] diamond 843 98.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30971867 30971867 PRJNA886442_P_NODE_8034_length_282_cov_1.444976_g7870_i0 PRJNA886442 8034 282 1.444976 4.07483232 Labilithrix sp. 1971228 Bacteria Bacteria 131 4.66e-33   NR HVJ91548.1 1971228 g7870 i0 73.1 2.90425531914894 93 25 98.9 0 3 281 428 520 HVJ91548.1 ATP-dependent chaperone ClpB [Labilithrix sp.] diamond 819 131 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;