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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA886442" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA886442 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2137353 2137353 PRJNA886442_P_NODE_1902_length_501_cov_2.773364_g1738_i0 PRJNA886442 1902 501 2.773364 13.89455364 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 206 6.440000000000001e-64   NR MDZ4801135.1 2212468 g1738 i0 86.9 1.2814371257485 107 14 64.1 0 181 501 5 111 MDZ4801135.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Bryobacteraceae bacterium] diamond 642 206 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
21263891 21263891 PRJNA886442_P_NODE_3057_length_408_cov_1.241791_g2893_i0 PRJNA886442 3057 408 1.241791 5.06650728 FCB group 1783270 Bacteria Bacteria 153 4.99e-40   NR MDQ3040800.1 1978231 g2893 i0 88.8 41.4852941176471 89 10 65.4 0 2 268 820 908 MDQ3040800.1 heavy metal translocating P-type ATPase [Acidobacteriota bacterium] diamond 16926 153 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24192967 24192967 PRJNA886442_P_NODE_13879_length_245_cov_0.906977_g13715_i0 PRJNA886442 13879 245 0.906977 2.22209365 Granulicella 940557 Bacteria Bacteria 125 8.73e-33   NR WP_263378038.1 474951 g13715 i0 79 1.98367346938776 81 17 99.2 0 2 244 142 222 WP_263378038.1 ABC transporter ATP-binding protein [Granulicella paludicola] diamond 486 125 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella paludicola
26802199 26802199 PRJNA886442_P_NODE_7781_length_286_cov_1.093897_g7617_i0 PRJNA886442 7781 286 1.093897 3.12854542 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 159 9.54e-43   NR HWI20223.1 2910147 g7617 i0 78.5 0.975524475524476 93 20 97.6 0 3 281 929 1021 HWI20223.1 TonB-dependent receptor [Vicinamibacterales bacterium] diamond 279 159 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27118432 27118432 PRJNA886442_P_NODE_14102_length_244_cov_0.912281_g13938_i0 PRJNA886442 14102 244 0.912281 2.22596564 Edaphobacter sp. 1934404 Bacteria Bacteria 145 4.33e-39   NR HEY0161240.1 1934404 g13938 i0 92.6 0.995901639344262 81 6 99.6 0 1 243 33 113 HEY0161240.1 polysaccharide biosynthesis C-terminal domain-containing protein [Edaphobacter sp.] diamond 243 145 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter sp.
27497934 27497934 PRJNA886442_P_NODE_13383_length_246_cov_0.901734_g13219_i0 PRJNA886442 13383 246 0.901734 2.21826564 Terriglobus sp. 1889013 Bacteria Bacteria 131 4.429999999999999e-35   NR HEY9137136.1 1889013 g13219 i0 98.5 0.817073170731707 67 1 81.7 0 44 244 1 67 HEY9137136.1 ABC transporter ATP-binding protein [Terriglobus sp.] diamond 201 131 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus sp.
27624330 27624330 PRJNA886442_P_NODE_7104_length_296_cov_1.748879_g6940_i0 PRJNA886442 7104 296 1.748879 5.17668184 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 65.9 2.33e-11   NR HEV8318110.1 2910147 g6940 i0 51.6 1.83445945945946 62 25 59.8 2 294 118 23 82 HEV8318110.1 RNA-binding protein [Vicinamibacterales bacterium] diamond 543 65.9 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
28894851 28894851 PRJNA886442_P_NODE_12208_length_249_cov_0.886364_g12044_i0 PRJNA886442 12208 249 0.886364 2.20704636 Edaphobacter 388463 Bacteria Bacteria 77.4 1.14e-14   NR WP_260706009.1 1933044 g12044 i0 61 2.91566265060241 77 23 92.8 1 239 9 28 97 WP_260706009.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [Edaphobacter flagellatus] diamond 726 77.8 0.994858611825193 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Edaphobacter Edaphobacter flagellatus
29108202 29108202 PRJNA886442_P_NODE_13048_length_247_cov_0.896552_g12884_i0 PRJNA886442 13048 247 0.896552 2.21448344 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 43.5 0.0183   NR HXF26870.1 2212468 g12884 i0 81.8 0.534412955465587 22 4 26.7 0 68 3 1 22 HXF26870.1 TIGR00282 family metallophosphoesterase [Bryobacteraceae bacterium] diamond 132 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30560752 30560752 PRJNA886442_P_NODE_12413_length_248_cov_0.891429_g12249_i0 PRJNA886442 12413 248 0.891429 2.21074392 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 86.7 9.19e-18   NR MFB3777564.1 2212468 g12249 i0 48.8 0.991935483870968 82 42 99.2 0 3 248 235 316 MFB3777564.1 hypothetical protein [Bryobacteraceae bacterium] diamond 246 86.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30940284 30940284 PRJNA886442_P_NODE_11494_length_250_cov_0.881356_g11330_i0 PRJNA886442 11494 250 0.881356 2.20339 Terracidiphilus sp. 1964191 Bacteria Bacteria 122 1.61e-30   NR HEX3893089.1 1964191 g11330 i0 68.7 1.968 83 23 99.6 1 1 249 193 272 HEX3893089.1 alpha-L-fucosidase [Terracidiphilus sp.] diamond 492 122 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
31445932 31445932 PRJNA886442_P_NODE_12336_length_248_cov_0.891429_g12172_i0 PRJNA886442 12336 248 0.891429 2.21074392 Terriglobia bacterium 2081523 Bacteria Bacteria 48.5 3.57e-4   NR HMD87200.1 2081523 g12172 i0 35.4 1.98387096774194 82 53 99.2 0 248 3 36 117 HMD87200.1 TolC family protein [Terriglobia bacterium] diamond 492 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
31698985 31698985 PRJNA886442_P_NODE_10317_length_253_cov_0.866667_g10153_i0 PRJNA886442 10317 253 0.866667 2.19266751 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.042   NR MBI1941179.1 1978231 g10153 i0 46.7 0.533596837944664 45 24 53.4 0 117 251 258 302 MBI1941179.1 DUF5107 domain-containing protein [Acidobacteriota bacterium] diamond 135 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;