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contig_metadata

1,328 rows where analysis = "diamond", bioproject = "PRJNA886442" and tax_kingdom = "Pseudomonadati"

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tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 1,328 ✖

bioproject 1

  • PRJNA886442 · 1,328 ✖

analysis 1

  • diamond · 1,328 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
861881 861881 PRJNA886442_P_NODE_11681_length_250_cov_0.881356_g11517_i0 PRJNA886442 11681 250 0.881356 2.20339 Methylobacillus sp. Pita1 3382642 Bacteria Bacteria 162 3.57e-44   NR WP_407995018.1 3382642 g11517 i0 100 0.984 82 0 98.4 0 3 248 778 859 WP_407995018.1 hemagglutinin repeat-containing protein [Methylobacillus sp. Pita1] diamond 246 162 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita1
861886 861886 PRJNA886442_P_NODE_11901_length_249_cov_1.295455_g11737_i0 PRJNA886442 11901 249 1.295455 3.22568295 Hyphomicrobium sp. 82 Bacteria Bacteria 172 9.28e-50   NR HET6322073.1 82 g11737 i0 100 1 83 0 100 0 249 1 206 288 HET6322073.1 MFS transporter [Hyphomicrobium sp.] diamond 249 172 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
861902 861902 PRJNA886442_P_NODE_12941_length_247_cov_0.896552_g12777_i0 PRJNA886442 12941 247 0.896552 2.21448344 Methylobacillus sp. Pita1 3382642 Bacteria Bacteria 121 1.18e-32   NR WP_407993163.1 3382642 g12777 i0 90.2 0.995951417004049 82 8 99.6 0 1 246 15 96 WP_407993163.1 peptidoglycan-associated lipoprotein Pal [Methylobacillus sp. Pita1] diamond 246 121 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita1
861912 861912 PRJNA886442_P_NODE_13521_length_246_cov_0.901734_g13357_i0 PRJNA886442 13521 246 0.901734 2.21826564 Methylobacillus flagellatus 405 Bacteria Bacteria 159 7.829999999999999e-46   NR WP_309564282.1 405 g13357 i0 98.8 0.98780487804878 81 1 98.8 0 244 2 129 209 WP_309564282.1 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada [Methylobacillus flagellatus] diamond 243 159 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
861914 861914 PRJNA886442_P_NODE_13641_length_245_cov_1.360465_g13477_i0 PRJNA886442 13641 245 1.360465 3.33313925 Methylobacillus 404 Bacteria Bacteria 158 4.49e-45   NR WP_025869684.1 406 g13477 i0 98.8 4.95918367346939 81 1 99.2 0 243 1 118 198 WP_025869684.1 sigma-54 interaction domain-containing protein [Methylobacillus glycogenes] diamond 1215 158 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus glycogenes
861950 861950 PRJNA886442_P_NODE_2261_length_464_cov_1.595908_g2097_i0 PRJNA886442 2261 464 1.595908 7.40501312 Methylobacillus flagellatus 405 Bacteria Bacteria 119 2.7299999999999997e-31   NR WP_309565294.1 405 g2097 i0 53.4 0.75 116 54 75 0 4 351 14 129 WP_309565294.1 helix-turn-helix transcriptional regulator [Methylobacillus flagellatus] diamond 348 119 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
861968 861968 PRJNA886442_P_NODE_3081_length_407_cov_1.338323_g2917_i0 PRJNA886442 3081 407 1.338323 5.44697461 Methylobacillus 404 Bacteria Bacteria 236 8.03e-74   NR WP_011480316.1 405 g2917 i0 94.8 1.99017199017199 135 7 99.5 0 406 2 218 352 WP_011480316.1 lipoprotein-releasing ABC transporter permease subunit [Methylobacillus flagellatus] diamond 810 236 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
861974 861974 PRJNA886442_P_NODE_3481_length_389_cov_0.987342_g3317_i0 PRJNA886442 3481 389 0.987342 3.84076038 Methylobacillus 404 Bacteria Bacteria 255 6.41e-76   NR WP_309566067.1 405 g3317 i0 96.1 3.97943444730077 129 5 99.5 0 388 2 1527 1655 WP_309566067.1 SdrD B-like domain-containing protein [Methylobacillus flagellatus] diamond 1548 255 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
861979 861979 PRJNA886442_P_NODE_3861_length_374_cov_1.016611_g3697_i0 PRJNA886442 3861 374 1.016611 3.80212514 Methylobacillus arboreus 755170 Bacteria Bacteria 211 4.14e-64   NR WP_230341459.1 755170 g3697 i0 92.7 0.994652406417112 124 9 99.5 0 2 373 200 323 WP_230341459.1 NTP/NDP exchange transporter [Methylobacillus arboreus] diamond 372 211 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus arboreus
861980 861980 PRJNA886442_P_NODE_3881_length_373_cov_1.040000_g3717_i0 PRJNA886442 3881 373 1.04 3.8792 Hyphomicrobium sp. 82 Bacteria Bacteria 204 4.93e-63   NR WP_291169975.1 82 g3717 i0 90.9 5.83914209115281 121 11 97.3 0 364 2 1 121 WP_291169975.1 sulfite exporter TauE/SafE family protein [Hyphomicrobium sp.] diamond 2178 204 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
862002 862002 PRJNA886442_P_NODE_5201_length_334_cov_1.195402_g5037_i0 PRJNA886442 5201 334 1.195402 3.99264268 Methylobacillus sp. 56818 Bacteria Bacteria 207 5.44e-65   NR WP_334106538.1 56818 g5037 i0 92.7 2.96407185628743 110 8 98.8 0 3 332 157 266 WP_334106538.1 ferritin-like domain-containing protein [Methylobacillus sp.] diamond 990 207 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
862010 862010 PRJNA886442_P_NODE_5721_length_322_cov_1.253012_g5557_i0 PRJNA886442 5721 322 1.253012 4.03469864 Methylobacillus sp. 56818 Bacteria Bacteria 192 2.8e-54   NR WP_287110159.1 56818 g5557 i0 96.3 0.996894409937888 107 4 99.7 0 321 1 837 943 WP_287110159.1 efflux RND transporter permease subunit [Methylobacillus sp.] diamond 321 192 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
862019 862019 PRJNA886442_P_NODE_6561_length_306_cov_1.313305_g6397_i0 PRJNA886442 6561 306 1.313305 4.0187133 Methylobacillus sp. 56818 Bacteria Bacteria 186 8.679999999999998e-55   NR WP_287111763.1 56818 g6397 i0 90.1 0.990196078431373 101 10 99 0 3 305 154 254 WP_287111763.1 adenosylmethionine--8-amino-7-oxononanoate transaminase [Methylobacillus sp.] diamond 303 186 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
862051 862051 PRJNA886442_P_NODE_8121_length_281_cov_1.125000_g7957_i0 PRJNA886442 8121 281 1.125 3.16125 Methylobacillus sp. 56818 Bacteria Bacteria 196 6.97e-58   NR WP_334108538.1 56818 g7957 i0 100 0.99288256227758 93 0 99.3 0 3 281 332 424 WP_334108538.1 proline--tRNA ligase [Methylobacillus sp.] diamond 279 196 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
862063 862063 PRJNA886442_P_NODE_8981_length_269_cov_1.193878_g8817_i0 PRJNA886442 8981 269 1.193878 3.21153182 Betaproteobacteria 28216 Bacteria Bacteria 153 1.51e-44   NR MBV6475485.1 1898103 g8817 i0 85.4 21.8364312267658 89 13 99.3 0 269 3 44 132 MBV6475485.1 Transcriptional regulatory protein CusR [Rhodocyclaceae bacterium] diamond 5874 153 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae   Rhodocyclaceae bacterium
862068 862068 PRJNA886442_P_NODE_9141_length_267_cov_1.206186_g8977_i0 PRJNA886442 9141 267 1.206186 3.22051662 Methylobacillus flagellatus 405 Bacteria Bacteria 158 1.0099999999999999e-42   NR WP_309565822.1 405 g8977 i0 98.9 0.98876404494382 88 1 98.9 0 266 3 473 560 WP_309565822.1 CusA/CzcA family heavy metal efflux RND transporter [Methylobacillus flagellatus] diamond 264 158 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
862074 862074 PRJNA886442_P_NODE_9361_length_264_cov_1.225131_g9197_i0 PRJNA886442 9361 264 1.225131 3.23434584 Methylobacillus gramineus 755169 Bacteria Bacteria 170 2.36e-50   NR WP_226771226.1 755169 g9197 i0 93.1 2.96590909090909 87 6 98.9 0 3 263 26 112 WP_226771226.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase [Methylobacillus gramineus] diamond 783 170 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus gramineus
1241445 1241445 PRJNA886442_P_NODE_3181_length_402_cov_1.185410_g3017_i0 PRJNA886442 3181 402 1.18541 4.7653482 Methylobacillus sp. 56818 Bacteria Bacteria 246 4.6700000000000005e-80   NR WP_287112281.1 56818 g3017 i0 94 2 134 8 100 0 1 402 104 237 WP_287112281.1 ABC transporter ATP-binding protein [Methylobacillus sp.] diamond 804 246 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
1241450 1241450 PRJNA886442_P_NODE_4161_length_363_cov_1.075862_g3997_i0 PRJNA886442 4161 363 1.075862 3.90537906 Methylobacillus sp. 56818 Bacteria Bacteria 163 1.2399999999999998e-47   NR WP_334106798.1 56818 g3997 i0 100 0.661157024793388 80 0 66.1 0 3 242 184 263 WP_334106798.1 heme ABC transporter ATP-binding protein [Methylobacillus sp.] diamond 240 163 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
1241477 1241477 PRJNA886442_P_NODE_8201_length_280_cov_1.130435_g8037_i0 PRJNA886442 8201 280 1.130435 3.165218 Methylobacillus flagellatus 405 Bacteria Bacteria 179 4.21e-53   NR WP_011480490.1 405 g8037 i0 88 0.985714285714286 92 11 98.6 0 278 3 19 110 WP_011480490.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase [Methylobacillus flagellatus] diamond 276 179 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
1241482 1241482 PRJNA886442_P_NODE_9101_length_267_cov_1.814433_g8937_i0 PRJNA886442 9101 267 1.814433 4.84453611 Methylobacillus 404 Bacteria Bacteria 167 1.6999999999999998e-48   NR WP_309564409.1 405 g8937 i0 98.9 3.95505617977528 88 1 98.9 0 266 3 79 166 WP_309564409.1 tetratricopeptide repeat protein [Methylobacillus flagellatus] diamond 1056 167 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
2137274 2137274 PRJNA886442_P_NODE_11102_length_251_cov_0.876404_g10938_i0 PRJNA886442 11102 251 0.876404 2.19977404 Methylobacillus arboreus 755170 Bacteria Bacteria 160 4.7e-45   NR WP_230342395.1 755170 g10938 i0 86.7 0.99203187250996006 83 11 99.2 0 2 250 199 281 WP_230342395.1 catalase [Methylobacillus arboreus] diamond 249 160 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus arboreus
2137287 2137287 PRJNA886442_P_NODE_11902_length_249_cov_1.278409_g11738_i0 PRJNA886442 11902 249 1.278409 3.18323841 Methylobacillus 404 Bacteria Bacteria 146 1.6999999999999996e-38   NR WP_011479108.1 405 g11738 i0 95.2 3 83 4 100 0 249 1 173 255 WP_011479108.1 MdtB/MuxB family multidrug efflux RND transporter permease subunit [Methylobacillus flagellatus] diamond 747 147 0.993197278911565 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
2137306 2137306 PRJNA886442_P_NODE_13002_length_247_cov_0.896552_g12838_i0 PRJNA886442 13002 247 0.896552 2.21448344 Rudaea sp. 2136325 Bacteria Bacteria 135 1.11e-38   NR WP_395641184.1 2136325 g12838 i0 95.8 0.874493927125506 72 3 87.4 0 32 247 1 72 WP_395641184.1 protein-export chaperone SecB [Rudaea sp.] diamond 216 135 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Rhodanobacteraceae Rudaea Rudaea sp.
2137311 2137311 PRJNA886442_P_NODE_13382_length_246_cov_0.901734_g13218_i0 PRJNA886442 13382 246 0.901734 2.21826564 Methylobacillus caricis 1971611 Bacteria Bacteria 154 9.289999999999997e-42   NR WP_226755608.1 1971611 g13218 i0 90.2 2 82 8 100 0 1 246 291 372 WP_226755608.1 dihydroxy-acid dehydratase [Methylobacillus caricis] diamond 492 154 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus caricis
2137312 2137312 PRJNA886442_P_NODE_13442_length_246_cov_0.901734_g13278_i0 PRJNA886442 13442 246 0.901734 2.21826564 Methylobacillus sp. 56818 Bacteria Bacteria 153 2.4699999999999998e-42   NR WP_334107995.1 56818 g13278 i0 97.5 0.98780487804878 81 2 98.8 0 2 244 150 230 WP_334107995.1 bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU [Methylobacillus sp.] diamond 243 153 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137322 2137322 PRJNA886442_P_NODE_14162_length_244_cov_0.912281_g13998_i0 PRJNA886442 14162 244 0.912281 2.22596564 Methylobacillus 404 Bacteria Bacteria 139 4.16e-39   NR WP_287110502.1 56818 g13998 i0 90.1 2.98770491803279 81 8 99.6 0 2 244 17 97 WP_287110502.1 HesA/MoeB/ThiF family protein [Methylobacillus sp.] diamond 729 140 0.992857142857143 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137353 2137353 PRJNA886442_P_NODE_1902_length_501_cov_2.773364_g1738_i0 PRJNA886442 1902 501 2.773364 13.89455364 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 206 6.440000000000001e-64   NR MDZ4801135.1 2212468 g1738 i0 86.9 1.2814371257485 107 14 64.1 0 181 501 5 111 MDZ4801135.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Bryobacteraceae bacterium] diamond 642 206 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
2137361 2137361 PRJNA886442_P_NODE_2482_length_445_cov_0.884409_g2318_i0 PRJNA886442 2482 445 0.884409 3.93562005 Methylobacillus sp. 56818 Bacteria Bacteria 290 1.3699999999999998e-88   NR WP_334107359.1 56818 g2318 i0 98 0.997752808988764 148 3 99.8 0 444 1 639 786 WP_334107359.1 UvrD-helicase domain-containing protein [Methylobacillus sp.] diamond 444 290 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137366 2137366 PRJNA886442_P_NODE_2_length_35073_cov_4.692486_g1_i0 PRJNA886442 2 35073 4.692486 1645.79561478 Hyphomicrobium sp. 82 Bacteria Bacteria 1052 0   NR MFA5952309.1 82 g1 i0 80.4 0.056710289966641 663 128 5.7 2 16305 14320 1 662 MFA5952309.1 portal protein [Hyphomicrobium sp.] diamond 1989 1052 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
2137370 2137370 PRJNA886442_P_NODE_3362_length_394_cov_1.190031_g3198_i0 PRJNA886442 3362 394 1.190031 4.68872214 Methylobacillus sp. 56818 Bacteria Bacteria 288 7.28e-93   NR WP_334107473.1 56818 g3198 i0 100 0.99746192893401 131 0 99.7 0 2 394 198 328 WP_334107473.1 beta-1,6-glucan synthase [Methylobacillus sp.] diamond 393 288 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137372 2137372 PRJNA886442_P_NODE_3522_length_387_cov_1.140127_g3358_i0 PRJNA886442 3522 387 1.140127 4.41229149 Methylobacillus sp. 56818 Bacteria Bacteria 140 1.21e-39   NR WP_334107292.1 56818 g3358 i0 100 1.01550387596899 65 0 50.4 0 193 387 1 65 WP_334107292.1 ribonuclease HI [Methylobacillus sp.] diamond 393 140 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137373 2137373 PRJNA886442_P_NODE_3702_length_380_cov_1.228013_g3538_i0 PRJNA886442 3702 380 1.228013 4.6664494 unclassified Methylophilus 2630143 Bacteria Bacteria 219 1.74e-69   NR WP_055825395.1 2630143 g3538 i0 90.5 0.994736842105263 126 12 99.5 0 378 1 53 178 WP_055825395.1 MULTISPECIES: ATP-binding cassette domain-containing protein [unclassified Methylophilus] diamond 378 219 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylophilus  
2137383 2137383 PRJNA886442_P_NODE_4402_length_355_cov_1.106383_g4238_i0 PRJNA886442 4402 355 1.106383 3.92765965 Methylobacillus sp. 56818 Bacteria Bacteria 221 5.3e-71   NR WP_287110185.1 56818 g4238 i0 91.5 0.988732394366197 117 10 98.9 0 354 4 110 226 WP_287110185.1 7-cyano-7-deazaguanine synthase QueC [Methylobacillus sp.] diamond 351 221 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137427 2137427 PRJNA886442_P_NODE_7102_length_296_cov_1.748879_g6938_i0 PRJNA886442 7102 296 1.748879 5.17668184 Methylobacillus flagellatus 405 Bacteria Bacteria 100 5.089999999999999e-23   NR WP_309566444.1 405 g6938 i0 100 1.01351351351351 50 0 50.7 0 2 151 247 296 WP_309566444.1 aldo/keto reductase [Methylobacillus flagellatus] diamond 300 100 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
2137433 2137433 PRJNA886442_P_NODE_7382_length_292_cov_1.022831_g7218_i0 PRJNA886442 7382 292 1.022831 2.98666652 Methylobacillus sp. 56818 Bacteria Bacteria 148 1.6e-42   NR WP_287112147.1 56818 g7218 i0 95.8 0.73972602739726 72 3 74 0 1 216 148 219 WP_287112147.1 endonuclease III [Methylobacillus sp.] diamond 216 148 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
2137470 2137470 PRJNA886442_P_NODE_9902_length_257_cov_1.271739_g9738_i0 PRJNA886442 9902 257 1.271739 3.26836923 Methylobacillus rhizosphaerae 551994 Bacteria Bacteria 161 3.21e-48   NR WP_089375064.1 551994 g9738 i0 97.6 0.992217898832685 85 2 99.2 0 1 255 63 147 WP_089375064.1 30S ribosomal protein S4 [Methylobacillus rhizosphaerae] diamond 255 161 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus rhizosphaerae
2517026 2517026 PRJNA886442_P_NODE_14482_length_243_cov_1.376471_g14318_i0 PRJNA886442 14482 243 1.376471 3.34482453 Hyphomicrobium sp. 82 Bacteria Bacteria 167 1.8999999999999997e-48   NR HET6320812.1 82 g14318 i0 100 2 81 0 100 0 1 243 183 263 HET6320812.1 D-alanyl-D-alanine carboxypeptidase family protein [Hyphomicrobium sp.] diamond 486 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
2517082 2517082 PRJNA886442_P_NODE_8502_length_276_cov_1.142857_g8338_i0 PRJNA886442 8502 276 1.142857 3.15428532 Methylobacillus flagellatus 405 Bacteria Bacteria 181 2.05e-52   NR WP_309564346.1 405 g8338 i0 100 0.989130434782609 91 0 98.9 0 3 275 329 419 WP_309564346.1 flavodoxin domain-containing protein [Methylobacillus flagellatus] diamond 273 181 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
2517087 2517087 PRJNA886442_P_NODE_8902_length_270_cov_1.456853_g8738_i0 PRJNA886442 8902 270 1.456853 3.9335031 Methylobacillus flagellatus 405 Bacteria Bacteria 184 5.58e-56   NR WP_011478566.1 405 g8738 i0 94.4 1 90 5 100 0 1 270 6 95 WP_011478566.1 tyrosine recombinase XerC [Methylobacillus flagellatus] diamond 270 184 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
2517088 2517088 PRJNA886442_P_NODE_9042_length_268_cov_1.476923_g8878_i0 PRJNA886442 9042 268 1.476923 3.95815364 Roseateles sp. 1971397 Bacteria Bacteria 181 1.3599999999999996e-52   NR WP_373714397.1 1971397 g8878 i0 100 0.996268656716418 89 0 99.6 0 1 267 360 448 WP_373714397.1 ATP-binding protein [Roseateles sp.] diamond 267 181 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
3412575 3412575 PRJNA886442_P_NODE_10143_length_254_cov_1.276243_g9979_i0 PRJNA886442 10143 254 1.276243 3.24165722 Sulfuritortus calidifontis 1914471 Bacteria Bacteria 157 8.55e-43   NR WP_126463939.1 1914471 g9979 i0 89.3 16.8661417322835 84 9 99.2 0 3 254 345 428 WP_126463939.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG [Sulfuritortus calidifontis] diamond 4284 157 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Thiobacillaceae Sulfuritortus Sulfuritortus calidifontis
3412582 3412582 PRJNA886442_P_NODE_10563_length_253_cov_0.866667_g10399_i0 PRJNA886442 10563 253 0.866667 2.19266751 Pedomonas mirosovicensis 2908641 Bacteria Bacteria 132 1.53e-33   NR WP_259279112.1 2908641 g10399 i0 80.7 0.984189723320158 83 16 98.4 0 3 251 16 98 WP_259279112.1 xanthine dehydrogenase family protein molybdopterin-binding subunit [Pedomonas mirosovicensis] diamond 249 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingosinicellaceae Pedomonas Pedomonas mirosovicensis
3412589 3412589 PRJNA886442_P_NODE_11043_length_251_cov_1.544944_g10879_i0 PRJNA886442 11043 251 1.544944 3.87780944 Myxococcia 32015 Bacteria Bacteria 61.2 9.94e-10   NR MBN9167310.1 2026763 g10879 i0 66.7 1.97211155378486 42 14 50.2 0 250 125 81 122 MBN9167310.1 NAD(+) kinase [Myxococcales bacterium] diamond 495 61.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
3412603 3412603 PRJNA886442_P_NODE_11863_length_249_cov_1.772727_g11699_i0 PRJNA886442 11863 249 1.772727 4.41409023 Methylobacillus flagellatus 405 Bacteria Bacteria 163 4.39e-45   NR WP_048811587.1 405 g11699 i0 96.4 1 83 3 100 0 1 249 566 648 WP_048811587.1 UvrD-helicase domain-containing protein [Methylobacillus flagellatus] diamond 249 163 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
3412615 3412615 PRJNA886442_P_NODE_12303_length_248_cov_1.291429_g12139_i0 PRJNA886442 12303 248 1.291429 3.20274392 Methylobacillus flagellatus 405 Bacteria Bacteria 153 3.56e-41   NR WP_309566766.1 405 g12139 i0 100 0.919354838709677 76 0 91.9 0 21 248 1 76 WP_309566766.1 putative bifunctional diguanylate cyclase/phosphodiesterase [Methylobacillus flagellatus] diamond 228 153 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
3412636 3412636 PRJNA886442_P_NODE_13703_length_245_cov_0.906977_g13539_i0 PRJNA886442 13703 245 0.906977 2.22209365 Methylobacillus 404 Bacteria Bacteria 164 8.78e-47   NR WP_011480296.1 404 g13539 i0 100 5.95102040816327 81 0 99.2 0 2 244 299 379 WP_011480296.1 MULTISPECIES: dihydrolipoyllysine-residue acetyltransferase [Methylobacillus] diamond 1458 164 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus  
3412686 3412686 PRJNA886442_P_NODE_2463_length_446_cov_1.455764_g2299_i0 PRJNA886442 2463 446 1.455764 6.49270744 Methylobacillus flagellatus 405 Bacteria Bacteria 300 7.539999999999997e-99   NR WP_309564868.1 405 g2299 i0 99.3 0.995515695067265 148 1 99.6 0 444 1 273 420 WP_309564868.1 3-phosphoshikimate 1-carboxyvinyltransferase [Methylobacillus flagellatus] diamond 444 300 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
3412699 3412699 PRJNA886442_P_NODE_3263_length_399_cov_0.815951_g3099_i0 PRJNA886442 3263 399 0.815951 3.25564449 Methylobacillus sp. 56818 Bacteria Bacteria 243 2.02e-79   NR WP_334108177.1 56818 g3099 i0 100 0.932330827067669 124 0 93.2 0 3 374 106 229 WP_334108177.1 monofunctional biosynthetic peptidoglycan transglycosylase [Methylobacillus sp.] diamond 372 243 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
3412732 3412732 PRJNA886442_P_NODE_5823_length_320_cov_1.016194_g5659_i0 PRJNA886442 5823 320 1.016194 3.2518208 Methylobacillus sp. Pita2 3383245 Bacteria Bacteria 208 4.54e-65   NR WP_407997033.1 3383245 g5659 i0 99.1 0.99375 106 1 99.4 0 1 318 124 229 WP_407997033.1 DNA-3-methyladenine glycosylase 2 [Methylobacillus sp. Pita2] diamond 318 208 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita2
3793388 3793388 PRJNA886442_P_NODE_2723_length_428_cov_1.098592_g2559_i0 PRJNA886442 2723 428 1.098592 4.70197376 Methylobacillus rhizosphaerae 551994 Bacteria Bacteria 278 4.539999999999999e-88   NR WP_089375774.1 551994 g2559 i0 92.9 0.988317757009346 141 10 98.8 0 424 2 18 158 WP_089375774.1 methanol/ethanol family PQQ-dependent dehydrogenase [Methylobacillus rhizosphaerae] diamond 423 278 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus rhizosphaerae
3793408 3793408 PRJNA886442_P_NODE_5603_length_325_cov_0.928571_g5439_i0 PRJNA886442 5603 325 0.928571 3.01785575 Ancylobacter sp. SL191 2995166 Bacteria Bacteria 69.7 3.58e-12   NR WP_267582495.1 2995166 g5439 i0 48.3 0.821538461538462 89 46 82.2 0 317 51 70 158 WP_267582495.1 hypothetical protein [Ancylobacter sp. SL191] diamond 267 69.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae Ancylobacter Ancylobacter sp. SL191
4690250 4690250 PRJNA886442_P_NODE_12084_length_249_cov_0.886364_g11920_i0 PRJNA886442 12084 249 0.886364 2.20704636 Methylibium sp. 2067992 Bacteria Bacteria 99 7.49e-24   NR MBA4216169.1 2067992 g11920 i0 100 0.626506024096386 52 0 62.7 0 94 249 64 115 MBA4216169.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD [Methylibium sp.] diamond 156 99 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Methylibium Methylibium sp.
4690261 4690261 PRJNA886442_P_NODE_12824_length_247_cov_0.896552_g12660_i0 PRJNA886442 12824 247 0.896552 2.21448344 Methylobacillus sp. 56818 Bacteria Bacteria 141 8.06e-37   NR WP_287112323.1 56818 g12660 i0 90.1 0.983805668016194 81 8 98.4 0 3 245 222 302 WP_287112323.1 phosphoenolpyruvate synthase [Methylobacillus sp.] diamond 243 141 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690271 4690271 PRJNA886442_P_NODE_13264_length_246_cov_0.901734_g13100_i0 PRJNA886442 13264 246 0.901734 2.21826564 Afipia sp. 1871052 Bacteria Bacteria 147 1.18e-40   NR MBN9584064.1 1871052 g13100 i0 88.9 0.98780487804878 81 9 98.8 0 3 245 236 316 MBN9584064.1 GGDEF domain-containing protein [Afipia sp.] diamond 243 147 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
4690272 4690272 PRJNA886442_P_NODE_13364_length_246_cov_0.901734_g13200_i0 PRJNA886442 13364 246 0.901734 2.21826564 Methylobacillus sp. 56818 Bacteria Bacteria 93.6 1.33e-20   NR WP_334108353.1 56818 g13200 i0 98 0.597560975609756 49 1 59.8 0 2 148 284 332 WP_334108353.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA [Methylobacillus sp.] diamond 147 93.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690273 4690273 PRJNA886442_P_NODE_1344_length_595_cov_0.896552_g1181_i0 PRJNA886442 1344 595 0.896552 5.3344844 Methylobacillus flagellatus 405 Bacteria Bacteria 216 4.91e-65   NR WP_309566314.1 405 g1181 i0 100 2.11764705882353 105 0 52.9 0 595 281 322 426 WP_309566314.1 murein hydrolase activator EnvC family protein [Methylobacillus flagellatus] diamond 1260 216 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
4690294 4690294 PRJNA886442_P_NODE_14604_length_243_cov_0.917647_g14440_i0 PRJNA886442 14604 243 0.917647 2.22988221 Flavobacterium 237 Bacteria Bacteria 149 2.4499999999999994e-42   NR MFM7894901.1 239 g14440 i0 93.8 11.8518518518519 80 5 98.8 0 3 242 52 131 MFM7894901.1 DNA polymerase III subunit beta [Flavobacterium sp.] diamond 2880 149 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
4690297 4690297 PRJNA886442_P_NODE_14684_length_243_cov_0.917647_g14520_i0 PRJNA886442 14684 243 0.917647 2.22988221 Methylobacillus sp. 56818 Bacteria Bacteria 162 5.9e-47   NR WP_334108887.1 56818 g14520 i0 95 0.987654320987654 80 4 98.8 0 242 3 25 104 WP_334108887.1 NAD(P)/FAD-dependent oxidoreductase [Methylobacillus sp.] diamond 240 162 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690324 4690324 PRJNA886442_P_NODE_2124_length_477_cov_0.965347_g1960_i0 PRJNA886442 2124 477 0.965347 4.60470519 Methylobacillus sp. 56818 Bacteria Bacteria 339 3.2299999999999993e-115   NR WP_334107397.1 56818 g1960 i0 100 0.993710691823899 158 0 99.4 0 2 475 91 248 WP_334107397.1 serine/threonine protein kinase [Methylobacillus sp.] diamond 474 339 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690329 4690329 PRJNA886442_P_NODE_2344_length_456_cov_0.814621_g2180_i0 PRJNA886442 2344 456 0.814621 3.71467176 Methylobacillus sp. 56818 Bacteria Bacteria 146 5.13e-38   NR WP_334108877.1 56818 g2180 i0 100 0.506578947368421 77 0 50.7 0 233 3 1 77 WP_334108877.1 phosphoenolpyruvate--protein phosphotransferase [Methylobacillus sp.] diamond 231 146 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690362 4690362 PRJNA886442_P_NODE_4944_length_341_cov_1.130597_g4780_i0 PRJNA886442 4944 341 1.130597 3.85533577 Methylobacillus sp. 56818 Bacteria Bacteria 164 1e-49   NR WP_334108306.1 56818 g4780 i0 98.7 0.686217008797654 78 1 68.6 0 106 339 1 78 WP_334108306.1 Holliday junction resolvase RuvX [Methylobacillus sp.] diamond 234 164 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
4690371 4690371 PRJNA886442_P_NODE_5524_length_326_cov_1.450593_g5360_i0 PRJNA886442 5524 326 1.450593 4.72893318 Hyphomicrobium sulfonivorans 121290 Bacteria Bacteria 200 1.6e-61   NR WP_173953272.1 121290 g5360 i0 88.9 3.97546012269939 108 12 99.4 0 326 3 131 238 WP_173953272.1 UDP-glucose 4-epimerase GalE [Hyphomicrobium sulfonivorans] diamond 1296 200 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sulfonivorans
4690372 4690372 PRJNA886442_P_NODE_5584_length_325_cov_1.238095_g5420_i0 PRJNA886442 5584 325 1.238095 4.02380875 Methylobacillus arboreus 755170 Bacteria Bacteria 213 1.76e-65   NR WP_230342055.1 755170 g5420 i0 98.1 2.99076923076923 108 2 99.7 0 2 325 213 320 WP_230342055.1 M48 family metallopeptidase [Methylobacillus arboreus] diamond 972 213 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus arboreus
4690375 4690375 PRJNA886442_P_NODE_5784_length_321_cov_0.943548_g5620_i0 PRJNA886442 5784 321 0.943548 3.02878908 Hyphomicrobium sp. 82 Bacteria Bacteria 166 3.55e-48   NR HWK32876.1 82 g5620 i0 94.4 0.841121495327103 90 5 84.1 0 52 321 1 90 HWK32876.1 sulfate ABC transporter substrate-binding protein [Hyphomicrobium sp.] diamond 270 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
4690384 4690384 PRJNA886442_P_NODE_6244_length_312_cov_0.903766_g6080_i0 PRJNA886442 6244 312 0.903766 2.81974992 Pseudomonadota 1224 Bacteria Bacteria 110 8.76e-26   NR WP_089375318.1 551994 g6080 i0 96.4 12.3846153846154 56 2 53.8 0 310 143 555 610 WP_089375318.1 glutamine--fructose-6-phosphate transaminase (isomerizing) [Methylobacillus rhizosphaerae] diamond 3864 110 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus rhizosphaerae
4690392 4690392 PRJNA886442_P_NODE_6704_length_303_cov_1.356522_g6540_i0 PRJNA886442 6704 303 1.356522 4.11026166 Methylobacillus sp. Pita2 3383245 Bacteria Bacteria 196 6.61e-61   NR WP_407996550.1 3383245 g6540 i0 100 1 101 0 100 0 1 303 103 203 WP_407996550.1 ABC transporter ATP-binding protein [Methylobacillus sp. Pita2] diamond 303 196 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita2
4690396 4690396 PRJNA886442_P_NODE_6944_length_299_cov_1.035398_g6780_i0 PRJNA886442 6944 299 1.035398 3.09584002 Methylobacillus flagellatus 405 Bacteria Bacteria 184 1.2099999999999995e-55   NR WP_309566546.1 405 g6780 i0 100 0.993311036789298 99 0 99.3 0 298 2 85 183 WP_309566546.1 flagellar assembly peptidoglycan hydrolase FlgJ [Methylobacillus flagellatus] diamond 297 184 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
4690399 4690399 PRJNA886442_P_NODE_7304_length_293_cov_1.063636_g7140_i0 PRJNA886442 7304 293 1.063636 3.11645348 Hyphomicrobium sp. 82 Bacteria Bacteria 179 5.41e-50   NR HWK37861.1 82 g7140 i0 94.8 0.993174061433447 97 5 99.3 0 291 1 566 662 HWK37861.1 efflux RND transporter permease subunit [Hyphomicrobium sp.] diamond 291 179 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
4690422 4690422 PRJNA886442_P_NODE_9424_length_263_cov_1.278947_g9260_i0 PRJNA886442 9424 263 1.278947 3.36363061 Methylobacillus 404 Bacteria Bacteria 167 1.86e-46   NR WP_407993224.1 3382642 g9260 i0 100 2.97718631178707 87 0 99.2 0 262 2 153 239 WP_407993224.1 secretin N-terminal domain-containing protein [Methylobacillus sp. Pita1] diamond 783 167 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita1
4690423 4690423 PRJNA886442_P_NODE_9444_length_263_cov_1.231579_g9280_i0 PRJNA886442 9444 263 1.231579 3.23905277 Methylobacillus sp. 56818 Bacteria Bacteria 153 6.91e-44   NR WP_334107707.1 56818 g9280 i0 95.3 0.96958174904943 85 3 95.8 1 10 261 1 85 WP_334107707.1 RNA polymerase sigma factor RpoH [Methylobacillus sp.] diamond 255 153 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
5069460 5069460 PRJNA886442_P_NODE_10244_length_253_cov_1.033333_g10080_i0 PRJNA886442 10244 253 1.033333 2.61433249 Hyphomicrobiaceae bacterium 2015799 Bacteria Bacteria 109 6.85e-26   NR HXF54086.1 2015799 g10080 i0 65.1 0.984189723320158 83 29 98.4 0 251 3 295 377 HXF54086.1 replicative DNA helicase [Hyphomicrobiaceae bacterium] diamond 249 109 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae   Hyphomicrobiaceae bacterium
5069469 5069469 PRJNA886442_P_NODE_11084_length_251_cov_1.247191_g10920_i0 PRJNA886442 11084 251 1.247191 3.13044941 Methylobacillus arboreus 755170 Bacteria Bacteria 161 3.7999999999999997e-47   NR WP_230343424.1 755170 g10920 i0 94.9 0.944223107569721 79 4 94.4 0 2 238 218 296 WP_230343424.1 SDR family oxidoreductase [Methylobacillus arboreus] diamond 237 161 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus arboreus
5069475 5069475 PRJNA886442_P_NODE_11924_length_249_cov_0.886364_g11760_i0 PRJNA886442 11924 249 0.886364 2.20704636 Terrimonas ferruginea 249 Bacteria Bacteria 158 3.1499999999999996e-47   NR WP_303895193.1 249 g11760 i0 88.9 0.975903614457831 81 9 97.6 0 5 247 24 104 WP_303895193.1 peptide deformylase [Terrimonas ferruginea] diamond 243 158 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Terrimonas Terrimonas ferruginea
5069509 5069509 PRJNA886442_P_NODE_2604_length_436_cov_0.790634_g2440_i0 PRJNA886442 2604 436 0.790634 3.44716424 Methylobacillus flagellatus 405 Bacteria Bacteria 273 7.25e-90   NR WP_309565001.1 405 g2440 i0 94.3 0.970183486238532 141 8 97 0 434 12 163 303 WP_309565001.1 LysR family transcriptional regulator [Methylobacillus flagellatus] diamond 423 273 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
5069539 5069539 PRJNA886442_P_NODE_6924_length_299_cov_1.380531_g6760_i0 PRJNA886442 6924 299 1.380531 4.12778769 Pseudomethylobacillus aquaticus 2676064 Bacteria Bacteria 197 2.94e-59   NR WP_123237781.1 2676064 g6760 i0 91.9 4.96655518394649 99 8 99.3 0 299 3 279 377 WP_123237781.1 adenylosuccinate synthase [Pseudomethylobacillus aquaticus] diamond 1485 197 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Pseudomethylobacillus Pseudomethylobacillus aquaticus
5069559 5069559 PRJNA886442_P_NODE_8764_length_272_cov_1.477387_g8600_i0 PRJNA886442 8764 272 1.477387 4.01849264 Hyphomicrobium sp. 82 Bacteria Bacteria 175 4.31e-50   NR MFA5902084.1 82 g8600 i0 83.3 4.96323529411765 90 15 99.3 0 272 3 344 433 MFA5902084.1 L,D-transpeptidase family protein [Hyphomicrobium sp.] diamond 1350 175 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
5965128 5965128 PRJNA886442_P_NODE_12385_length_248_cov_0.891429_g12221_i0 PRJNA886442 12385 248 0.891429 2.21074392 Methylobacillus 404 Bacteria Bacteria 158 7.689999999999998e-43   NR WP_287111877.1 56818 g12221 i0 96.3 4.95967741935484 82 3 99.2 0 1 246 784 865 WP_287111877.1 monovalent cation/H+ antiporter subunit A [Methylobacillus sp.] diamond 1230 158 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
5965149 5965149 PRJNA886442_P_NODE_13865_length_245_cov_0.906977_g13701_i0 PRJNA886442 13865 245 0.906977 2.22209365 Methylophilus 16 Bacteria Bacteria 156 4.8799999999999997e-42   NR WP_018986547.1 17 g13701 i0 92.5 15.6734693877551 80 6 98 0 243 4 126 205 WP_018986547.1 transcription-repair coupling factor [Methylophilus methylotrophus] diamond 3840 157 0.993630573248408 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylophilus Methylophilus methylotrophus
5965210 5965210 PRJNA886442_P_NODE_4365_length_356_cov_1.378092_g4201_i0 PRJNA886442 4365 356 1.378092 4.90600752 Methylobacillus flagellatus 405 Bacteria Bacteria 243 2.98e-77   NR WP_309564681.1 405 g4201 i0 99.2 0.99438202247191 118 1 99.4 0 356 3 24 141 WP_309564681.1 acetate/propionate family kinase [Methylobacillus flagellatus] diamond 354 243 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
5965229 5965229 PRJNA886442_P_NODE_5865_length_319_cov_1.223577_g5701_i0 PRJNA886442 5865 319 1.223577 3.90321063 Methylobacillus flagellatus 405 Bacteria Bacteria 182 6.039999999999998e-55   NR WP_048811482.1 405 g5701 i0 87.7 1.99373040752351 106 13 99.7 0 318 1 133 238 WP_048811482.1 diaminopimelate epimerase [Methylobacillus flagellatus] diamond 636 182 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
5965230 5965230 PRJNA886442_P_NODE_5_length_19780_cov_4.638859_g4_i0 PRJNA886442 5 19780 4.638859 917.5663102 Hyphomicrobiales 356 Bacteria Bacteria 570 7.36e-178   NR WP_246725464.1 1641855 g4 i0 58.6 0.2237108190091 481 187 7.2 3 9374 7956 31 507 WP_246725464.1 phage terminase large subunit [Beijerinckia sp. L45] diamond 4425 570 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Beijerinckiaceae Beijerinckia Beijerinckia sp. L45
5965248 5965248 PRJNA886442_P_NODE_7625_length_288_cov_1.600000_g7461_i0 PRJNA886442 7625 288 1.6 4.608 Methylobacillus rhizosphaerae 551994 Bacteria Bacteria 186 6.77e-58   NR WP_089375385.1 551994 g7461 i0 94.7 0.989583333333333 95 5 99 0 286 2 51 145 WP_089375385.1 imidazoleglycerol-phosphate dehydratase HisB [Methylobacillus rhizosphaerae] diamond 285 186 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus rhizosphaerae
5965250 5965250 PRJNA886442_P_NODE_7805_length_285_cov_1.679245_g7641_i0 PRJNA886442 7805 285 1.679245 4.78584825 Methylobacillus sp. Pita2 3383245 Bacteria Bacteria 76.6 6.11e-14   NR WP_407996542.1 3383245 g7641 i0 100 0.347368421052632 33 0 34.7 0 284 186 371 403 WP_407996542.1 acyl-CoA dehydrogenase family protein [Methylobacillus sp. Pita2] diamond 99 76.6 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita2
5965256 5965256 PRJNA886442_P_NODE_8205_length_280_cov_1.130435_g8041_i0 PRJNA886442 8205 280 1.130435 3.165218 Methylobacillus arboreus 755170 Bacteria Bacteria 176 5.029999999999999e-52   NR WP_230343120.1 755170 g8041 i0 92.5 2.98928571428571 93 7 99.6 0 280 2 23 115 WP_230343120.1 NADH:flavin oxidoreductase/NADH oxidase [Methylobacillus arboreus] diamond 837 176 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus arboreus
5965270 5965270 PRJNA886442_P_NODE_9065_length_268_cov_1.200000_g8901_i0 PRJNA886442 9065 268 1.2 3.216 Methylobacillus flagellatus 405 Bacteria Bacteria 159 4.3299999999999997e-47   NR WP_309565658.1 405 g8901 i0 92.9 0.951492537313433 85 6 95.1 0 266 12 122 206 WP_309565658.1 lytic transglycosylase domain-containing protein [Methylobacillus flagellatus] diamond 255 159 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
6345446 6345446 PRJNA886442_P_NODE_12825_length_247_cov_0.896552_g12661_i0 PRJNA886442 12825 247 0.896552 2.21448344 Flavisolibacter sp. 1954249 Bacteria Bacteria 150 1.34e-41   NR HEY1023252.1 1954249 g12661 i0 100 1.9919028340081 82 0 99.6 0 2 247 109 190 HEY1023252.1 SusC/RagA family TonB-linked outer membrane protein [Flavisolibacter sp.] diamond 492 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Flavisolibacter Flavisolibacter sp.
6345494 6345494 PRJNA886442_P_NODE_4765_length_345_cov_1.147059_g4601_i0 PRJNA886442 4765 345 1.147059 3.95735355 Methylobacillus sp. Pita1 3382642 Bacteria Bacteria 226 2.9e-72   NR WP_407993401.1 3382642 g4601 i0 98.3 1 115 2 100 0 1 345 69 183 WP_407993401.1 LysR family transcriptional regulator [Methylobacillus sp. Pita1] diamond 345 226 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp. Pita1
6345524 6345524 PRJNA886442_P_NODE_9485_length_262_cov_1.650794_g9321_i0 PRJNA886442 9485 262 1.650794 4.32508028 Rhodocyclaceae bacterium 1898103 Bacteria Bacteria 151 2.9099999999999998e-40   NR MBX9849714.1 1898103 g9321 i0 92 2.97709923664122 87 7 99.6 0 2 262 667 753 MBX9849714.1 heavy metal translocating P-type ATPase [Rhodocyclaceae bacterium] diamond 780 151 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae   Rhodocyclaceae bacterium
7239928 7239928 PRJNA886442_P_NODE_10066_length_255_cov_1.285714_g9902_i0 PRJNA886442 10066 255 1.285714 3.2785707 Methylobacillus 404 Bacteria Bacteria 154 1.11e-44   NR WP_011479740.1 404 g9902 i0 92.9 0.988235294117647 84 6 98.8 0 253 2 162 245 WP_011479740.1 MULTISPECIES: acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase [Methylobacillus] diamond 252 154 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus  
7239979 7239979 PRJNA886442_P_NODE_1306_length_604_cov_1.041431_g1145_i0 PRJNA886442 1306 604 1.041431 6.29024324 Methylobacillus 404 Bacteria Bacteria 308 2.41e-102   NR WP_025869327.1 406 g1145 i0 90.1 1.70860927152318 172 15 85.4 1 89 604 1 170 WP_025869327.1 PstS family phosphate ABC transporter substrate-binding protein [Methylobacillus glycogenes] diamond 1032 308 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus glycogenes
7239981 7239981 PRJNA886442_P_NODE_13206_length_246_cov_1.329480_g13042_i0 PRJNA886442 13206 246 1.32948 3.2705208 Methylobacillus flagellatus 405 Bacteria Bacteria 157 1.53e-44   NR WP_309566272.1 405 g13042 i0 98.8 0.98780487804878 81 1 98.8 0 2 244 34 114 WP_309566272.1 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ [Methylobacillus flagellatus] diamond 243 157 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus flagellatus
7239989 7239989 PRJNA886442_P_NODE_13886_length_245_cov_0.906977_g13722_i0 PRJNA886442 13886 245 0.906977 2.22209365 Pseudoxanthomonas 83618 Bacteria Bacteria 164 3.68e-49   NR WP_183638041.1 83618 g13722 i0 98.8 0.991836734693878 81 1 99.2 0 243 1 17 97 WP_183638041.1 MULTISPECIES: class I SAM-dependent methyltransferase [Pseudoxanthomonas] diamond 243 164 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Pseudoxanthomonas  
7239998 7239998 PRJNA886442_P_NODE_14406_length_244_cov_0.912281_g14242_i0 PRJNA886442 14406 244 0.912281 2.22596564 Sphingomonas 13687 Bacteria Bacteria 120 2.3e-30   NR WP_294077997.1 28214 g14242 i0 67.5 5.91393442622951 80 26 98.4 0 5 244 247 326 WP_294077997.1 class I SAM-dependent methyltransferase [Sphingomonas sp.] diamond 1443 120 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
7240004 7240004 PRJNA886442_P_NODE_14586_length_243_cov_0.917647_g14422_i0 PRJNA886442 14586 243 0.917647 2.22988221 Afipia sp. 1871052 Bacteria Bacteria 145 9.95e-40   NR MBN9586342.1 1871052 g14422 i0 92.6 1 81 6 100 0 243 1 291 371 MBN9586342.1 deoxyguanosinetriphosphate triphosphohydrolase [Afipia sp.] diamond 243 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
7240006 7240006 PRJNA886442_P_NODE_14746_length_243_cov_0.917647_g14582_i0 PRJNA886442 14746 243 0.917647 2.22988221 Methylobacillus sp. 56818 Bacteria Bacteria 156 8.33e-43   NR WP_287111453.1 56818 g14582 i0 95.1 1 81 4 100 0 1 243 139 219 WP_287111453.1 ABC transporter ATP-binding protein [Methylobacillus sp.] diamond 243 156 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
7240015 7240015 PRJNA886442_P_NODE_15246_length_242_cov_0.923077_g15082_i0 PRJNA886442 15246 242 0.923077 2.23384634 Methylobacillus sp. 56818 Bacteria Bacteria 140 1.16e-36   NR WP_287110617.1 56818 g15082 i0 95 1.98347107438017 80 4 99.2 0 241 2 936 1015 WP_287110617.1 efflux RND transporter permease subunit [Methylobacillus sp.] diamond 480 140 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
7240023 7240023 PRJNA886442_P_NODE_1786_length_518_cov_1.002247_g1622_i0 PRJNA886442 1786 518 1.002247 5.19163946 Methylobacillus sp. 56818 Bacteria Bacteria 321 6.369999999999998e-107   NR WP_334106849.1 56818 g1622 i0 99.4 0.996138996138996 172 1 99.6 0 3 518 34 205 WP_334106849.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Methylobacillus sp.] diamond 516 321 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Methylophilaceae Methylobacillus Methylobacillus sp.
7240024 7240024 PRJNA886442_P_NODE_1886_length_504_cov_0.911833_g1722_i0 PRJNA886442 1886 504 0.911833 4.59563832 Hyphomicrobium sp. 82 Bacteria Bacteria 300 2.4799999999999995e-99   NR HWK37589.1 82 g1722 i0 89.8 0.994047619047619 167 17 99.4 0 2 502 77 243 HWK37589.1 glycosyltransferase [Hyphomicrobium sp.] diamond 501 300 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.
7240052 7240052 PRJNA886442_P_NODE_3406_length_392_cov_0.978056_g3242_i0 PRJNA886442 3406 392 0.978056 3.83397952 Hyphomicrobium sp. 82 Bacteria Bacteria 203 7.310000000000001e-59   NR HET6322520.1 82 g3242 i0 98.1 2.36479591836735 103 2 78.8 0 392 84 619 721 HET6322520.1 EAL domain-containing protein [Hyphomicrobium sp.] diamond 927 203 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Hyphomicrobiaceae Hyphomicrobium Hyphomicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;