RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA886442" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA886442 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28697836 28697836 PRJNA886442_P_NODE_1467_length_570_cov_4.607646_g1304_i0 PRJNA886442 1467 570 4.607646 26.2635822 Chronabinb virus 3129777 Viruses Viruses 92.8 2.18e-19   NR WZH58773.1 3129777 g1304 i0 40.4 0.715789473684211 136 73 67.9 3 8 394 73 207 WZH58773.1 MAG: RNA-dependent RNA polymerase, partial [Chronabinb virus] diamond 408 92.8 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chronabinb virus
30340375 30340375 PRJNA886442_P_NODE_152_length_1642_cov_7.357553_g89_i0 PRJNA886442 152 1642 7.357553 120.81102026 Ripagryb virus 3130702 Viruses Viruses 232 1.37e-63   NR WZH60146.1 3130702 g89 i0 36.7 0.796589524969549 436 245 78.2 12 1290 7 118 530 WZH60146.1 MAG: RNA-dependent RNA polymerase [Ripagryb virus] diamond 1308 232 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Ripagryb virus
31224355 31224355 PRJNA886442_P_NODE_795_length_776_cov_4.800853_g638_i0 PRJNA886442 795 776 4.800853 37.25461928 Permutotetraviridae sp. 2585115 Viruses Viruses 50.4 0.00314   NR QDH90594.1 2585115 g638 i0 30.6 0.695876288659794 180 106 65.3 9 773 267 124 295 QDH90594.1 MAG: hypothetical protein H2RhizoLitter8801_000002 [Permutotetraviridae sp.] diamond 540 50.4 1 Viruses   Orthornavirae       Permutotetraviridae   Permutotetraviridae sp.
31287626 31287626 PRJNA886442_P_NODE_1615_length_545_cov_2.737288_g1452_i0 PRJNA886442 1615 545 2.737288 14.9182196 Sobelivirales sp. 2809868 Viruses Viruses 47 0.0165   NR UHS71496.1 2809868 g1452 i0 33.3 0.693577981651376 126 75 65.5 4 358 2 34 157 UHS71496.1 MAG: hypothetical protein 3 [Sobelivirales sp.] diamond 378 47 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales     Sobelivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;