RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA885753" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA885753 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12340853 12340853 PRJNA885753_S_NODE_2150_length_308_cov_1.327660_g2132_i0 PRJNA885753 2150 308 1.32766 4.0891928 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 194 3.69e-61   NR MBX9724270.1 2364082 g2132 i0 93.9 0.954545454545455 98 6 95.5 0 3 296 73 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 294 194 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
28255510 28255510 PRJNA885753_S_NODE_3066_length_269_cov_1.030612_g3048_i0 PRJNA885753 3066 269 1.030612 2.77234628 Cyanobacteria bacterium K_DeepCast_35m_m2_023 2775549 Bacteria Bacteria 132 1.36e-33   NR MBM5800003.1 2775549 g3048 i0 67.4 0.992565055762082 89 29 99.3 0 269 3 435 523 MBM5800003.1 phage terminase large subunit family protein [Cyanobacteria bacterium K_DeepCast_35m_m2_023] diamond 267 132 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium K_DeepCast_35m_m2_023
29076686 29076686 PRJNA885753_S_NODE_2008_length_317_cov_0.959016_g1990_i0 PRJNA885753 2008 317 0.959016 3.04008072 Cyanobacteria bacterium P01_D01_bin.56 3023279 Bacteria Bacteria 45.4 0.00511   NR MEM9805869.1 3023279 g1990 i0 56.1 0.38801261829653 41 18 38.8 0 192 314 50 90 MEM9805869.1 hypothetical protein [Cyanobacteria bacterium P01_D01_bin.56] diamond 123 45.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium P01_D01_bin.56

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;