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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA884104" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 30 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8513990 8513990 PRJNA884104_S_NODE_59507_length_271_cov_1.166667_g58764_i0 PRJNA884104 59507 271 1.166667 3.16166757 Pseudomonadati 3379134 Bacteria Bacteria 150 9.72e-40   NR MDL1956812.1 1621989 g58764 i0 82.2 10.9594095940959 90 16 99.6 0 271 2 156 245 MDL1956812.1 ATP-dependent chaperone ClpB [Candidatus Desulfofervidus auxilii] diamond 2970 151 0.993377483443709 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Desulfofervidia Candidatus Desulfofervidales Candidatus Desulfofervidaceae Candidatus Desulfofervidus Candidatus Desulfofervidus auxilii
8894162 8894162 PRJNA884104_S_NODE_68907_length_251_cov_0.865169_g68164_i0 PRJNA884104 68907 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 125 2.66e-31   NR MDE5879764.1 885 g68164 i0 68.7 86.3067729083665 83 26 99.2 0 250 2 378 460 MDE5879764.1 endopeptidase La [Desulfovibrio sp.] diamond 21663 125 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
9788429 9788429 PRJNA884104_S_NODE_27728_length_386_cov_1.974441_g26985_i0 PRJNA884104 27728 386 1.974441 7.62134226 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 89 1.48e-18   NR HZX34998.1 2202153 g26985 i0 44.7 1.9119170984456 123 57 91.7 6 30 383 15 131 HZX34998.1 carbonic anhydrase [Thermodesulfobacteriota bacterium] diamond 738 89 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
9788466 9788466 PRJNA884104_S_NODE_29568_length_375_cov_1.033113_g28825_i0 PRJNA884104 29568 375 1.033113 3.87417375 Geomonas ferrireducens 2570227 Bacteria Bacteria 116 2.91e-28   NR WP_246044532.1 2570227 g28825 i0 48.4 2.944 122 63 97.6 0 374 9 154 275 WP_246044532.1 sensor histidine kinase [Geomonas ferrireducens] diamond 1104 116 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geomonas Geomonas ferrireducens
12339390 12339390 PRJNA884104_S_NODE_18590_length_467_cov_2.045685_g17848_i0 PRJNA884104 18590 467 2.045685 9.55334895 Pseudomonadati 3379134 Bacteria Bacteria 77.8 5.25e-14   NR WP_073612808.1 231440 g17848 i0 35.8 4.45182012847966 137 78 86.1 4 408 7 10 139 WP_073612808.1 carbonic anhydrase [Desulfopila aestuarii] diamond 2079 77.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfopila Desulfopila aestuarii
12340404 12340404 PRJNA884104_S_NODE_66750_length_254_cov_1.845304_g66007_i0 PRJNA884104 66750 254 1.845304 4.68707216 Bacteria 2 Bacteria Bacteria 127 7.33e-32   NR WP_300668609.1 2045199 g66007 i0 71.3 7.85433070866142 80 23 94.5 0 251 12 397 476 WP_300668609.1 Ig-like domain-containing protein [Desulfoluna sp.] diamond 1995 127 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfolunaceae Desulfoluna Desulfoluna sp.
25086428 25086428 PRJNA884104_S_NODE_21120_length_439_cov_2.308743_g20377_i0 PRJNA884104 21120 439 2.308743 10.13538177 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 134 3.09e-33   NR RJP83704.1 2049433 g20377 i0 47.6 1.98177676537585 145 72 97 2 429 4 104 247 RJP83704.1 MAG: hypothetical protein C4522_00045 [Desulfobacteraceae bacterium] diamond 870 134 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
26612068 26612068 PRJNA884104_S_NODE_41441_length_322_cov_1.236948_g40698_i0 PRJNA884104 41441 322 1.236948 3.98297256 Desulfatibacillum aliphaticivorans 218208 Bacteria Bacteria 86.3 4.95e-17   NR WP_015947357.1 218208 g40698 i0 40.4 0.968944099378882 104 54 96.9 4 313 2 369 464 WP_015947357.1 thrombospondin type-1 domain-containing protein [Desulfatibacillum aliphaticivorans] diamond 312 86.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfatibacillaceae Desulfatibacillum Desulfatibacillum aliphaticivorans
26738454 26738454 PRJNA884104_S_NODE_42601_length_318_cov_1.387755_g41858_i0 PRJNA884104 42601 318 1.387755 4.4130609 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 43.9 0.0362   NR HAY38674.1 2049433 g41858 i0 39 0.556603773584906 59 33 55.7 2 137 313 922 977 HAY38674.1 sugar-binding protein [Desulfobacteraceae bacterium] diamond 177 43.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
26770614 26770614 PRJNA884104_S_NODE_73641_length_248_cov_0.880000_g72898_i0 PRJNA884104 73641 248 0.88 2.1824 Desulfoprunum benzoelyticum 1506996 Bacteria Bacteria 121 9.589999999999999e-30   NR WP_183352231.1 1506996 g72898 i0 69.5 1.97177419354839 82 25 99.2 0 248 3 426 507 WP_183352231.1 glycogen/starch/alpha-glucan phosphorylase [Desulfoprunum benzoelyticum] diamond 489 121 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfoprunum Desulfoprunum benzoelyticum
27023759 27023759 PRJNA884104_S_NODE_48162_length_301_cov_1.350877_g47419_i0 PRJNA884104 48162 301 1.350877 4.06613977 Desulfovibrio sp. 885 Bacteria Bacteria 45.1 0.00127   NR MCR5562927.1 885 g47419 i0 51.2 1.90365448504983 41 20 40.9 0 12 134 2 42 MCR5562927.1 hypothetical protein [Desulfovibrio sp.] diamond 573 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.
27149789 27149789 PRJNA884104_S_NODE_26822_length_392_cov_2.222571_g26079_i0 PRJNA884104 26822 392 2.222571 8.71247832 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 87.8 3.12e-17   NR MFC1834884.1 2202153 g26079 i0 43 0.76530612244898 100 53 76.5 1 339 40 246 341 MFC1834884.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 300 87.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27466402 27466402 PRJNA884104_S_NODE_60183_length_269_cov_1.571429_g59440_i0 PRJNA884104 60183 269 1.571429 4.22714401 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 54.3 4.3e-6   NR MCI0454035.1 2080303 g59440 i0 36.8 2.49814126394052 76 48 84.8 0 230 3 424 499 MCI0454035.1 lipase maturation factor family protein [Candidatus Dadabacteria bacterium] diamond 672 54.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
27537329 27537329 PRJNA884104_S_NODE_37903_length_335_cov_1.374046_g37160_i0 PRJNA884104 37903 335 1.374046 4.6030541 Pseudomonadati 3379134 Bacteria Bacteria 46.2 0.00635   NR MFC1835572.1 2202153 g37160 i0 55.9 0.608955223880597 34 15 30.4 0 14 115 408 441 MFC1835572.1 ankyrin repeat domain-containing protein [Thermodesulfobacteriota bacterium] diamond 204 46.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27907956 27907956 PRJNA884104_S_NODE_20985_length_441_cov_1.222826_g20242_i0 PRJNA884104 20985 441 1.222826 5.39266266 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 97.1 2.29e-21   NR NNG01928.1 2049433 g20242 i0 37 2.81632653061224 146 67 99.3 4 2 439 64 184 NNG01928.1 GNAT family N-acetyltransferase [Desulfobacteraceae bacterium] diamond 1242 97.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
28516168 28516168 PRJNA884104_S_NODE_52887_length_288_cov_1.074419_g52144_i0 PRJNA884104 52887 288 1.074419 3.09432672 Pseudomonadati 3379134 Bacteria Bacteria 57.8 3.15e-7   NR WP_144307517.1 370038 g52144 i0 33.7 3.01041666666667 95 44 99 2 286 2 260 335 WP_144307517.1 asparagine--tRNA ligase [Oceanidesulfovibrio marinus] diamond 867 58.2 0.993127147766323 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Oceanidesulfovibrio Oceanidesulfovibrio marinus
28729260 28729260 PRJNA884104_S_NODE_67047_length_254_cov_1.127072_g66304_i0 PRJNA884104 67047 254 1.127072 2.86276288 Desulfobulbaceae bacterium A2 1934250 Bacteria Bacteria 43.1 0.0295   NR OQX11741.1 1934250 g66304 i0 38.9 0.637795275590551 54 30 63.8 1 238 77 9 59 OQX11741.1 MAG: cobalamin biosynthesis protein CobD [Desulfobulbaceae bacterium A2] diamond 162 43.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium A2
29076645 29076645 PRJNA884104_S_NODE_35408_length_345_cov_2.227941_g34665_i0 PRJNA884104 35408 345 2.227941 7.68639645 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 73.6 6.01e-13   NR HZX34998.1 2202153 g34665 i0 41 1.80869565217391 105 55 87.8 4 6 308 7 108 HZX34998.1 carbonic anhydrase [Thermodesulfobacteriota bacterium] diamond 624 73.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29234492 29234492 PRJNA884104_S_NODE_78749_length_245_cov_0.906977_g78006_i0 PRJNA884104 78749 245 0.906977 2.22209365 Desulfobacterales bacterium HSG17 3055595 Bacteria Bacteria 67 8.84e-11   NR MDM8539420.1 3055595 g78006 i0 50 2.20408163265306 58 29 71 0 243 70 8 65 MDM8539420.1 ATP-binding protein [Desulfobacterales bacterium HSG17] diamond 540 67 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium HSG17
29297536 29297536 PRJNA884104_S_NODE_31189_length_366_cov_1.283276_g30446_i0 PRJNA884104 31189 366 1.283276 4.69679016 Pelovirga sp. 2913515 Bacteria Bacteria 73.9 1.7e-12   NR MFO7578279.1 2913515 g30446 i0 52.2 0.549180327868853 67 28 51.6 1 194 6 5 71 MFO7578279.1 hydroxylamine reductase [Pelovirga sp.] diamond 201 73.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Pelovirga Pelovirga sp.
29739288 29739288 PRJNA884104_S_NODE_61690_length_266_cov_1.088083_g60947_i0 PRJNA884104 61690 266 1.088083 2.89430078 Desulfobacterales bacterium 2044940 Bacteria Bacteria 92 2.91e-20   NR MBF0118597.1 2044940 g60947 i0 53.6 0.947368421052632 84 39 94.7 0 14 265 42 125 MBF0118597.1 2-oxo acid dehydrogenase subunit E2 [Desulfobacterales bacterium] diamond 252 92 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
30908661 30908661 PRJNA884104_S_NODE_67574_length_252_cov_2.441341_g66831_i0 PRJNA884104 67574 252 2.441341 6.15217932 Desulforhopalus vacuolatus 40414 Bacteria Bacteria 42.4 0.0164   NR WP_205219209.1 40414 g66831 i0 41 0.464285714285714 39 23 46.4 0 36 152 1 39 WP_205219209.1 AzlD domain-containing protein [Desulforhopalus vacuolatus] diamond 117 42.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulforhopalus Desulforhopalus vacuolatus
31074477 31074477 PRJNA884104_S_NODE_84395_length_242_cov_0.911243_g83652_i0 PRJNA884104 84395 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 47 2.21e-4   NR WP_081436040.1 218208 g83652 i0 28.4 4.10330578512397 67 48 83.1 0 36 236 12 78 WP_081436040.1 tetratricopeptide repeat protein [Desulfatibacillum aliphaticivorans] diamond 993 47.4 0.991561181434599 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfatibacillaceae Desulfatibacillum Desulfatibacillum aliphaticivorans
31129323 31129323 PRJNA884104_S_NODE_60815_length_268_cov_1.169231_g60072_i0 PRJNA884104 60815 268 1.169231 3.13353908 Syntrophobacterales bacterium 2282155 Bacteria Bacteria 50.8 5.28e-5   NR MEJ2233298.1 2282155 g60072 i0 43.1 0.727611940298508 65 30 64.9 2 3 176 181 245 MEJ2233298.1 SDR family NAD(P)-dependent oxidoreductase [Syntrophobacterales bacterium] diamond 195 50.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales     Syntrophobacterales bacterium
31319335 31319335 PRJNA884104_S_NODE_67535_length_253_cov_0.794444_g66792_i0 PRJNA884104 67535 253 0.794444 2.00994332 Desulfobacteria bacterium 3024420 Bacteria Bacteria 65.5 3.41e-10   NR HEX3015182.1 3024420 g66792 i0 54.5 1.99209486166008 55 25 65.2 0 243 79 86 140 HEX3015182.1 6-bladed beta-propeller [Desulfobacteria bacterium] diamond 504 65.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria       Desulfobacteria bacterium
31319336 31319336 PRJNA884104_S_NODE_69455_length_251_cov_0.865169_g68712_i0 PRJNA884104 69455 251 0.865169 2.17157419 Syntrophus sp. (in: bacteria) 48412 Bacteria Bacteria 40.8 0.0293   NR MBA4419379.1 48412 g68712 i0 81 0.250996015936255 21 4 25.1 0 168 106 22 42 MBA4419379.1 hypothetical protein [Syntrophus sp. (in: bacteria)] diamond 63 40.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
31382719 31382719 PRJNA884104_S_NODE_28296_length_383_cov_0.864516_g27553_i0 PRJNA884104 28296 383 0.864516 3.31109628 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 106 8.04e-24   NR MCP4748906.1 2049433 g27553 i0 42.8 2.05221932114882 138 61 94 1 372 13 1460 1597 MCP4748906.1 AAA family ATPase [Desulfobacteraceae bacterium] diamond 786 106 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31604096 31604096 PRJNA884104_S_NODE_59456_length_271_cov_1.404040_g58713_i0 PRJNA884104 59456 271 1.40404 3.8049484 Syntrophorhabdaceae bacterium 2660714 Bacteria Bacteria 68.9 2.87e-11   NR HVN96031.1 2660714 g58713 i0 37.1 3.90774907749078 89 55 97.4 1 6 269 7 95 HVN96031.1 pitrilysin family protein [Syntrophorhabdaceae bacterium] diamond 1059 68.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae   Syntrophorhabdaceae bacterium
32616229 32616229 PRJNA884104_S_NODE_47280_length_304_cov_1.000000_g46537_i0 PRJNA884104 47280 304 1 3.04 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 72.8 1.89e-12   NR MCP3944050.1 2049433 g46537 i0 41.5 0.809210526315789 82 47 80.9 1 247 2 205 285 MCP3944050.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 246 72.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
32616251 32616251 PRJNA884104_S_NODE_81960_length_243_cov_1.358824_g81217_i0 PRJNA884104 81960 243 1.358824 3.30194232 Desulfomicrobium orale DSM 12838 888061 Bacteria Bacteria 41.2 0.0328   NR AMD92091.1 888061 g81217 i0 41.1 0.901234567901235 73 33 86.4 4 16 225 6 71 AMD92091.1 hypothetical protein AXF15_02530 [Desulfomicrobium orale DSM 12838] diamond 219 41.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfomicrobiaceae Desulfomicrobium Desulfomicrobium orale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;