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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA883229" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA883229 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3410650 3410650 PRJNA883229_P_NODE_12723_length_247_cov_0.896552_g12677_i0 PRJNA883229 12723 247 0.896552 2.21448344 Lentisphaeria bacterium 2053569 Bacteria Bacteria 157 1.9899999999999992e-43   NR MBQ7730716.1 2053569 g12677 i0 90 4.88259109311741 80 8 97.2 0 245 6 397 476 MBQ7730716.1 phosphoethanolamine transferase [Lentisphaeria bacterium] diamond 1206 157 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
3410672 3410672 PRJNA883229_P_NODE_14223_length_245_cov_0.906977_g14177_i0 PRJNA883229 14223 245 0.906977 2.22209365 Lentisphaeria bacterium 2053569 Bacteria Bacteria 177 2.21e-51   NR MBQ6597412.1 2053569 g14177 i0 100 0.991836734693878 81 0 99.2 0 244 2 133 213 MBQ6597412.1 FAD-dependent oxidoreductase [Lentisphaeria bacterium] diamond 243 177 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
4688434 4688434 PRJNA883229_P_NODE_8924_length_253_cov_0.866667_g8878_i0 PRJNA883229 8924 253 0.866667 2.19266751 Lentisphaerota bacterium 1932692 Bacteria Bacteria 85.1 1.01e-17   NR MBE6370922.1 1932692 g8878 i0 100 0.545454545454545 46 0 54.5 0 252 115 24 69 MBE6370922.1 type II secretion system protein [Lentisphaerota bacterium] diamond 138 85.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
7238205 7238205 PRJNA883229_P_NODE_9966_length_251_cov_0.876404_g9920_i0 PRJNA883229 9966 251 0.876404 2.19977404 Pseudomonadati 3379134 Bacteria Bacteria 176 6.81e-49   NR MBE6382465.1 1932692 g9920 i0 96.4 27.7649402390438 83 3 99.2 0 3 251 63 145 MBE6382465.1 isoleucine--tRNA ligase [Lentisphaerota bacterium] diamond 6969 177 0.994350282485876 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
11063495 11063495 PRJNA883229_P_NODE_11509_length_249_cov_0.886364_g11463_i0 PRJNA883229 11509 249 0.886364 2.20704636 Lentisphaeria bacterium 2053569 Bacteria Bacteria 169 5.14e-49   NR MBR4718154.1 2053569 g11463 i0 100 4 83 0 100 0 1 249 66 148 MBR4718154.1 class I tRNA ligase family protein [Lentisphaeria bacterium] diamond 996 169 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
18711275 18711275 PRJNA883229_P_NODE_13195_length_247_cov_0.896552_g13149_i0 PRJNA883229 13195 247 0.896552 2.21448344 Lentisphaeria bacterium 2053569 Bacteria Bacteria 152 2.18e-45   NR MBR4665657.1 2053569 g13149 i0 95.1 0.995951417004049 82 4 99.6 0 1 246 34 115 MBR4665657.1 biopolymer transporter ExbD [Lentisphaeria bacterium] diamond 246 152 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
26833962 26833962 PRJNA883229_P_NODE_9001_length_253_cov_0.866667_g8955_i0 PRJNA883229 9001 253 0.866667 2.19266751 Lentisphaeria bacterium 2053569 Bacteria Bacteria 145 3.4599999999999987e-41   NR MBR2964188.1 2053569 g8955 i0 91.9 0.877470355731225 74 6 87.7 0 223 2 2 75 MBR2964188.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase [Lentisphaeria bacterium] diamond 222 145 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27213228 27213228 PRJNA883229_P_NODE_6902_length_276_cov_1.325123_g6856_i0 PRJNA883229 6902 276 1.325123 3.65733948 Lentisphaeria bacterium 2053569 Bacteria Bacteria 146 5.16e-41   NR MBR2373327.1 2053569 g6856 i0 80.8 0.847826086956522 78 15 84.8 0 235 2 94 171 MBR2373327.1 DUF4037 domain-containing protein [Lentisphaeria bacterium] diamond 234 146 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27252879 27252879 PRJNA883229_P_NODE_13563_length_246_cov_0.901734_g13517_i0 PRJNA883229 13563 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 65.1 5.13e-10   NR MBE6370507.1 1932692 g13517 i0 97 0.804878048780488 33 1 40.2 0 100 2 1 33 MBE6370507.1 ATP-dependent chaperone ClpB [Lentisphaerota bacterium] diamond 198 65.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
27624228 27624228 PRJNA883229_P_NODE_11364_length_249_cov_0.886364_g11318_i0 PRJNA883229 11364 249 0.886364 2.20704636 Lentisphaeria bacterium 2053569 Bacteria Bacteria 87 2.58e-20   NR MBR4957565.1 2053569 g11318 i0 100 1.06024096385542 44 0 53 0 3 134 39 82 MBR4957565.1 anti-sigma regulatory factor [Lentisphaeria bacterium] diamond 264 87 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27632082 27632082 PRJNA883229_P_NODE_8184_length_258_cov_1.264865_g8138_i0 PRJNA883229 8184 258 1.264865 3.2633517 PVC group 1783257 Bacteria Bacteria 47.8 7.34e-4   NR MBO5899633.1 2053569 g8138 i0 46.8 1.30232558139535 47 24 54.7 1 96 236 389 434 MBO5899633.1 recombinase family protein [Lentisphaeria bacterium] diamond 336 47.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27632083 27632083 PRJNA883229_P_NODE_9544_length_252_cov_0.871508_g9498_i0 PRJNA883229 9544 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 49.3 1.82e-4   NR MBR1999411.1 2053569 g9498 i0 50 4.13095238095238 50 25 59.5 0 207 58 180 229 MBR1999411.1 recombinase RecA [Lentisphaeria bacterium] diamond 1041 49.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
27687570 27687570 PRJNA883229_P_NODE_12764_length_247_cov_0.896552_g12718_i0 PRJNA883229 12764 247 0.896552 2.21448344 Lentisphaeria bacterium 2053569 Bacteria Bacteria 161 4.7999999999999994e-48   NR MBR4662331.1 2053569 g12718 i0 95.1 1.9919028340081 82 4 99.6 0 2 247 7 88 MBR4662331.1 imidazole glycerol phosphate synthase subunit HisH [Lentisphaeria bacterium] diamond 492 161 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28034653 28034653 PRJNA883229_P_NODE_13705_length_246_cov_0.901734_g13659_i0 PRJNA883229 13705 246 0.901734 2.21826564 Lentisphaeria bacterium 2053569 Bacteria Bacteria 64.3 2.44e-10   NR MBQ6352248.1 2053569 g13659 i0 66.7 0.585365853658537 48 16 58.5 0 244 101 150 197 MBQ6352248.1 helix-turn-helix transcriptional regulator [Lentisphaeria bacterium] diamond 144 64.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28318633 28318633 PRJNA883229_P_NODE_12046_length_248_cov_0.891429_g12000_i0 PRJNA883229 12046 248 0.891429 2.21074392 Candidatus Spyradenecus faecavium 2840947 Bacteria Bacteria 160 9.96e-44   NR HIV09669.1 2840947 g12000 i0 95.1 0.991935483870968 82 4 99.2 0 3 248 43 124 HIV09669.1 restriction endonuclease [Candidatus Spyradenecus faecavium] diamond 246 160 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae Candidatus Spyradenecus Candidatus Spyradenecus faecavium
28792126 28792126 PRJNA883229_P_NODE_14427_length_245_cov_0.906977_g14381_i0 PRJNA883229 14427 245 0.906977 2.22209365 Lentisphaeria bacterium 2053569 Bacteria Bacteria 151 2.66e-42   NR MBR2963376.1 2053569 g14381 i0 93.9 1.00408163265306 82 4 99.2 1 3 245 48 129 MBR2963376.1 cysteine desulfurase NifS [Lentisphaeria bacterium] diamond 246 151 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28918388 28918388 PRJNA883229_P_NODE_14228_length_245_cov_0.906977_g14182_i0 PRJNA883229 14228 245 0.906977 2.22209365 Lentisphaeria bacterium 2053569 Bacteria Bacteria 167 1.49e-50   NR MBO4633076.1 2053569 g14182 i0 95.1 0.991836734693878 81 4 99.2 0 1 243 29 109 MBO4633076.1 SIS domain-containing protein [Lentisphaeria bacterium] diamond 243 167 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
28981965 28981965 PRJNA883229_P_NODE_8388_length_255_cov_1.406593_g8342_i0 PRJNA883229 8388 255 1.406593 3.58681215 Lentisphaeria bacterium 2053569 Bacteria Bacteria 62.4 2.16e-10   NR MBO4646647.1 2053569 g8342 i0 77.8 0.635294117647059 54 10 62.4 2 34 192 2 54 MBO4646647.1 hypothetical protein [Lentisphaeria bacterium] diamond 162 62.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
30000274 30000274 PRJNA883229_P_NODE_15891_length_243_cov_0.917647_g15845_i0 PRJNA883229 15891 243 0.917647 2.22988221 Pseudomonadati 3379134 Bacteria Bacteria 86.7 1.77e-18   NR MBN2302449.1 1932692 g15845 i0 55.1 2.87654320987654 78 34 96.3 1 2 235 63 139 MBN2302449.1 type III pantothenate kinase [Lentisphaerota bacterium] diamond 699 87 0.996551724137931 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
30718776 30718776 PRJNA883229_P_NODE_10794_length_250_cov_0.881356_g10748_i0 PRJNA883229 10794 250 0.881356 2.20339 Lentisphaeria bacterium 2053569 Bacteria Bacteria 163 8.929999999999999e-48   NR MBQ6599259.1 2053569 g10748 i0 97.6 1.992 83 2 99.6 0 1 249 36 118 MBQ6599259.1 methionyl-tRNA formyltransferase [Lentisphaeria bacterium] diamond 498 163 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
31517217 31517217 PRJNA883229_P_NODE_7496_length_267_cov_1.603093_g7450_i0 PRJNA883229 7496 267 1.603093 4.28025831 Pseudomonadati 3379134 Bacteria Bacteria 79.3 2.74e-16   NR NLG35798.1 1932692 g7450 i0 100 3.21348314606742 41 0 46.1 0 1 123 123 163 NLG35798.1 V-type ATP synthase subunit K [Lentisphaerota bacterium] diamond 858 79.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
31667138 31667138 PRJNA883229_P_NODE_15617_length_243_cov_0.917647_g15571_i0 PRJNA883229 15617 243 0.917647 2.22988221 Lentisphaerota bacterium 1932692 Bacteria Bacteria 162 4.650000000000001e-44   NR MBE6372192.1 1932692 g15571 i0 100 1 81 0 100 0 243 1 172 252 MBE6372192.1 hypothetical protein [Lentisphaerota bacterium] diamond 243 162 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
31730374 31730374 PRJNA883229_P_NODE_13377_length_246_cov_0.901734_g13331_i0 PRJNA883229 13377 246 0.901734 2.21826564 Lentisphaeria bacterium 2053569 Bacteria Bacteria 119 5.8099999999999994e-30   NR MBO4633398.1 2053569 g13331 i0 80.2 1.86585365853659 81 15 98.8 1 3 245 136 215 MBO4633398.1 molecular chaperone DnaJ [Lentisphaeria bacterium] diamond 459 119 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32300369 32300369 PRJNA883229_P_NODE_9399_length_252_cov_0.871508_g9353_i0 PRJNA883229 9399 252 0.871508 2.19620016 Lentisphaeria bacterium 2053569 Bacteria Bacteria 80.1 2.71e-17   NR MBO7088999.1 2053569 g9353 i0 92.9 1 42 3 50 0 128 3 1 42 MBO7088999.1 pyridoxal-phosphate dependent enzyme [Lentisphaeria bacterium] diamond 252 80.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32331986 32331986 PRJNA883229_P_NODE_14219_length_245_cov_0.906977_g14173_i0 PRJNA883229 14219 245 0.906977 2.22209365 Lentisphaeria bacterium 2053569 Bacteria Bacteria 144 5.97e-40   NR MBR4665738.1 2053569 g14173 i0 80.2 0.991836734693878 81 16 99.2 0 2 244 180 260 MBR4665738.1 radical SAM protein [Lentisphaeria bacterium] diamond 243 144 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32363470 32363470 PRJNA883229_P_NODE_12959_length_247_cov_0.896552_g12913_i0 PRJNA883229 12959 247 0.896552 2.21448344 Lentisphaeria bacterium 2053569 Bacteria Bacteria 164 2.19e-46   NR MBP5585774.1 2053569 g12913 i0 98.8 2.98785425101215 82 1 99.6 0 2 247 51 132 MBP5585774.1 MATE family efflux transporter [Lentisphaeria bacterium] diamond 738 164 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32363492 32363492 PRJNA883229_P_NODE_8159_length_258_cov_1.643243_g8113_i0 PRJNA883229 8159 258 1.643243 4.23956694 Lentisphaeria bacterium 2053569 Bacteria Bacteria 67.8 5.18e-11   NR MBO7088305.1 2053569 g8113 i0 67.3 1.1046511627907 52 15 60.5 1 156 1 193 242 MBO7088305.1 hypothetical protein [Lentisphaeria bacterium] diamond 285 67.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32395034 32395034 PRJNA883229_P_NODE_13619_length_246_cov_0.901734_g13573_i0 PRJNA883229 13619 246 0.901734 2.21826564 Lentisphaeria bacterium 2053569 Bacteria Bacteria 181 4.08e-51   NR HCG26956.1 2053569 g13573 i0 100 1 82 0 100 0 1 246 167 248 HCG26956.1 hypothetical protein [Lentisphaeria bacterium] diamond 246 181 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
32836452 32836452 PRJNA883229_P_NODE_15900_length_243_cov_0.917647_g15854_i0 PRJNA883229 15900 243 0.917647 2.22988221 Lentisphaerota bacterium 1932692 Bacteria Bacteria 169 6.67e-48   NR MBE6373233.1 1932692 g15854 i0 100 1 81 0 100 0 1 243 264 344 MBE6373233.1 hypothetical protein [Lentisphaerota bacterium] diamond 243 169 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;