RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA883229" and tax_clade = "Caudoviricetes code 15 clade"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Caudoviricetes code 15 clade · 1 ✖

bioproject 1

  • PRJNA883229 · 1 ✖

analysis 1

  • diamond · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29897535 29897535 PRJNA883229_P_NODE_8811_length_253_cov_0.866667_g8765_i0 PRJNA883229 8811 253 0.866667 2.19266751 phage Lak_Megaphage_RVC_AP3_GC26 3109225 Viruses Viruses 55.1 1.97e-6   NR WQJ51155.1 3109225 g8765 i0 40.6 0.758893280632411 64 37 75.9 1 253 62 32 94 WQJ51155.1 MAG: SbcC-like subunit of palindrome specific endonuclease [phage Lak_Megaphage_RVC_AP3_GC26] diamond 192 55.1 1 Viruses Caudoviricetes code 15 clade Heunggongvirae Uroviricota Caudoviricetes       phage Lak_Megaphage_RVC_AP3_GC26

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;