RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA881257" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA881257 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26643652 26643652 PRJNA881257_P_NODE_13161_length_177_cov_1.031250_g12916_i0 PRJNA881257 13161 177 1.03125 1.8253125 Minisyncoccota bacterium 2053589 Bacteria Bacteria 99.4 3.689999999999999e-24   NR MFM7088336.1 2053589 g12916 i0 84.5 0.983050847457627 58 9 98.3 0 3 176 38 95 MFM7088336.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 174 99.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27023654 27023654 PRJNA881257_P_NODE_12022_length_187_cov_1.507246_g11777_i0 PRJNA881257 12022 187 1.507246 2.81855002 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62 1.55e-9   NR MFM7089012.1 2053589 g11777 i0 90.3 0.497326203208556 31 3 49.7 0 92 184 1 31 MFM7089012.1 ubiquitin carboxyl-terminal hydrolase [Candidatus Paceibacterota bacterium] diamond 93 62 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28918343 28918343 PRJNA881257_P_NODE_12688_length_181_cov_1.181818_g12443_i0 PRJNA881257 12688 181 1.181818 2.13909058 Minisyncoccota bacterium 2053589 Bacteria Bacteria 122 2.1599999999999998e-32   NR MFM7088046.1 2053589 g12443 i0 94.9 0.977900552486188 59 3 97.8 0 179 3 114 172 MFM7088046.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 177 122 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30403313 30403313 PRJNA881257_P_NODE_14513_length_169_cov_0.866667_g14268_i0 PRJNA881257 14513 169 0.866667 1.46466723 Minisyncoccota bacterium 2053589 Bacteria Bacteria 92.8 4.65e-21   NR MFM7088046.1 2053589 g14268 i0 80 0.976331360946746 55 11 97.6 0 167 3 220 274 MFM7088046.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 92.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32489966 32489966 PRJNA881257_P_NODE_10679_length_201_cov_1.342105_g10434_i0 PRJNA881257 10679 201 1.342105 2.69763105 Minisyncoccota bacterium 2053589 Bacteria Bacteria 69.3 2.24e-13   NR MFM7088732.1 2053589 g10434 i0 63.5 0.776119402985075 52 19 77.6 0 159 4 42 93 MFM7088732.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 156 69.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;