RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA881257" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA881257 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27371707 27371707 PRJNA881257_P_NODE_18303_length_161_cov_3.446429_g18058_i0 PRJNA881257 18303 161 3.446429 5.54875069 Malassezia arunalokei 1514897 Fungi Fungi 82.8 9.26e-17   NR WFD16437.1 1514897 g18058 i0 75 1.19254658385093 64 4 96.9 1 156 1 934 997 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 192 82.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
27497796 27497796 PRJNA881257_P_NODE_15443_length_167_cov_0.881356_g15198_i0 PRJNA881257 15443 167 0.881356 1.47186452 Malassezia arunalokei 1514897 Fungi Fungi 67 1.64e-11   NR WFD15415.1 1514897 g15198 i0 96.6 0.520958083832335 29 1 52.1 0 52 138 1 29 WFD15415.1 RNA-binding RNA annealing protein [Malassezia arunalokei] diamond 87 67 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei
32553377 32553377 PRJNA881257_P_NODE_9879_length_211_cov_3.580247_g9634_i0 PRJNA881257 9879 211 3.580247 7.55432117 Malassezia arunalokei 1514897 Fungi Fungi 124 3.4299999999999996e-31   NR WFD16437.1 1514897 g9634 i0 100 0.981042654028436 69 0 98.1 0 209 3 2631 2699 WFD16437.1 hypothetical protein MARU1_002474 [Malassezia arunalokei] diamond 207 124 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia arunalokei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;