contig_metadata
17 rows where analysis = "diamond", bioproject = "PRJNA881257" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12337663 | 12337663 | PRJNA881257_P_NODE_13850_length_171_cov_1.278689_g13605_i0 | PRJNA881257 | 13850 | 171 | 1.278689 | 2.18655819 | Bacillus cereus | 1396 | Bacteria | Bacteria | 69.3 | 7.89e-14 | NR | WP_367153085.1 | 1396 | g13605 | i0 | 100 | 0.56140350877193 | 32 | 0 | 56.1 | 0 | 171 | 76 | 46 | 77 | WP_367153085.1 hypothetical protein, partial [Bacillus cereus] | diamond | 96 | 69.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 27284566 | 27284566 | PRJNA881257_P_NODE_13323_length_175_cov_1.500000_g13078_i0 | PRJNA881257 | 13323 | 175 | 1.5 | 2.625 | FCB group | 1783270 | Bacteria | Bacteria | 53.1 | 2.36e-6 | NR | WP_187770574.1 | 1405 | g13078 | i0 | 48.2 | 5.67428571428571 | 56 | 29 | 96 | 0 | 171 | 4 | 2 | 57 | WP_187770574.1 HNH endonuclease [Bacillus mycoides] | diamond | 993 | 53.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 27339934 | 27339934 | PRJNA881257_P_NODE_11143_length_196_cov_0.809524_g10898_i0 | PRJNA881257 | 11143 | 196 | 0.809524 | 1.58666704 | Melissococcus plutonius | 33970 | Bacteria | Bacteria | 39.7 | 0.0257 | NR | WP_263615054.1 | 33970 | g10898 | i0 | 100 | 0.229591836734694 | 15 | 0 | 23 | 0 | 2 | 46 | 4 | 18 | WP_263615054.1 hypothetical protein [Melissococcus plutonius] | diamond | 45 | 39.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Melissococcus | Melissococcus plutonius | ||
| 27403098 | 27403098 | PRJNA881257_P_NODE_18003_length_162_cov_0.920354_g17758_i0 | PRJNA881257 | 18003 | 162 | 0.920354 | 1.49097348 | Anaerococcus hydrogenalis | 33029 | Bacteria | Bacteria | 109 | 2.53e-28 | NR | WP_102197840.1 | 33029 | g17758 | i0 | 92.5 | 0.981481481481482 | 53 | 4 | 98.1 | 0 | 3 | 161 | 97 | 149 | WP_102197840.1 TVP38/TMEM64 family protein [Anaerococcus hydrogenalis] | diamond | 159 | 109 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus hydrogenalis | ||
| 27907875 | 27907875 | PRJNA881257_P_NODE_15645_length_166_cov_1.777778_g15400_i0 | PRJNA881257 | 15645 | 166 | 1.777778 | 2.95111148 | Ruminococcus sp. | 41978 | Bacteria | Bacteria | 55.5 | 4.12e-7 | NR | MBQ7385171.1 | 41978 | g15400 | i0 | 55.6 | 0.975903614457831 | 54 | 22 | 97.6 | 1 | 164 | 3 | 315 | 366 | MBQ7385171.1 ATP-dependent DNA helicase RecG [Ruminococcus sp.] | diamond | 162 | 55.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruminococcus | Ruminococcus sp. | ||
| 29076564 | 29076564 | PRJNA881257_P_NODE_7788_length_253_cov_1.019608_g7543_i0 | PRJNA881257 | 7788 | 253 | 1.019608 | 2.57960824 | Roseburia hominis | 301301 | Bacteria | Bacteria | 44.7 | 0.00203 | NR | MCF2641895.1 | 301301 | g7543 | i0 | 38.2 | 1.19762845849802 | 55 | 28 | 61.7 | 2 | 166 | 11 | 6 | 57 | MCF2641895.1 thioredoxin fold domain-containing protein [Roseburia hominis] | diamond | 303 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Roseburia | Roseburia hominis | ||
| 29202837 | 29202837 | PRJNA881257_P_NODE_17389_length_163_cov_0.912281_g17144_i0 | PRJNA881257 | 17389 | 163 | 0.912281 | 1.48701803 | Streptococcus sanguinis | 1305 | Bacteria | Bacteria | 110 | 1.86e-28 | NR | WP_268685714.1 | 1305 | g17144 | i0 | 100 | 0.993865030674847 | 54 | 0 | 99.4 | 0 | 1 | 162 | 152 | 205 | WP_268685714.1 HNH endonuclease family protein [Streptococcus sanguinis] | diamond | 162 | 110 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sanguinis | ||
| 29368602 | 29368602 | PRJNA881257_P_NODE_12749_length_180_cov_1.587786_g12504_i0 | PRJNA881257 | 12749 | 180 | 1.587786 | 2.8580148 | Anaerococcus | 165779 | Bacteria | Bacteria | 100 | 3.3300000000000003e-26 | NR | MDD6918474.1 | 1891242 | g12504 | i0 | 81.4 | 1.96666666666667 | 59 | 11 | 98.3 | 0 | 177 | 1 | 20 | 78 | MDD6918474.1 redoxin family protein [Peptoniphilaceae bacterium] | diamond | 354 | 101 | 0.99009900990099 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilaceae bacterium | |||
| 29929132 | 29929132 | PRJNA881257_P_NODE_18131_length_162_cov_0.920354_g17886_i0 | PRJNA881257 | 18131 | 162 | 0.920354 | 1.49097348 | Staphylococcus caprae | 29380 | Bacteria | Bacteria | 69.3 | 2.95e-12 | NR | WP_103212566.1 | 29380 | g17886 | i0 | 68.5 | 1 | 54 | 17 | 100 | 0 | 1 | 162 | 177 | 230 | WP_103212566.1 hypothetical protein [Staphylococcus caprae] | diamond | 162 | 69.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus caprae | ||
| 30000263 | 30000263 | PRJNA881257_P_NODE_12891_length_179_cov_1.338462_g12646_i0 | PRJNA881257 | 12891 | 179 | 1.338462 | 2.39584698 | Anaerococcus | 165779 | Bacteria | Bacteria | 102 | 4.61e-24 | NR | WP_115594860.1 | 165779 | g12646 | i0 | 72.9 | 5.93296089385475 | 59 | 16 | 98.9 | 0 | 178 | 2 | 242 | 300 | WP_115594860.1 MULTISPECIES: hemolysin family protein [Anaerococcus] | diamond | 1062 | 103 | 0.990291262135922 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | |||
| 30284881 | 30284881 | PRJNA881257_P_NODE_14312_length_169_cov_0.866667_g14067_i0 | PRJNA881257 | 14312 | 169 | 0.866667 | 1.46466723 | Candidatus Faecimorpha | 2840586 | Bacteria | Bacteria | 106 | 2.33e-25 | NR | MBQ7915177.1 | 1879010 | g14067 | i0 | 83.6 | 1.95266272189349 | 55 | 9 | 97.6 | 0 | 167 | 3 | 251 | 305 | MBQ7915177.1 glycoside hydrolase family 28 protein [Bacillota bacterium] | diamond | 330 | 106 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 30308577 | 30308577 | PRJNA881257_P_NODE_12152_length_186_cov_1.204380_g11907_i0 | PRJNA881257 | 12152 | 186 | 1.20438 | 2.2401468 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 103 | 6.73e-26 | NR | MBR5271034.1 | 2044939 | g11907 | i0 | 80.6 | 1 | 62 | 12 | 100 | 0 | 1 | 186 | 98 | 159 | MBR5271034.1 helix-turn-helix domain-containing protein [Clostridia bacterium] | diamond | 186 | 103 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 30940146 | 30940146 | PRJNA881257_P_NODE_14934_length_168_cov_0.873950_g14689_i0 | PRJNA881257 | 14934 | 168 | 0.87395 | 1.468236 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 40.8 | 0.0489 | NR | MFO7291371.1 | 1879010 | g14689 | i0 | 57.1 | 0.625 | 35 | 14 | 60.7 | 1 | 126 | 25 | 131 | 165 | MFO7291371.1 hypothetical protein [Bacillota bacterium] | diamond | 105 | 40.8 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31066624 | 31066624 | PRJNA881257_P_NODE_16075_length_166_cov_0.888889_g15830_i0 | PRJNA881257 | 16075 | 166 | 0.888889 | 1.47555574 | Acutalibacteraceae bacterium | 3077420 | Bacteria | Bacteria | 104 | 1.0999999999999998e-24 | NR | MEE1076817.1 | 3077420 | g15830 | i0 | 98.2 | 0.993975903614458 | 55 | 1 | 99.4 | 0 | 166 | 2 | 361 | 415 | MEE1076817.1 signal recognition particle protein [Acutalibacteraceae bacterium] | diamond | 165 | 104 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Acutalibacteraceae | Acutalibacteraceae bacterium | |||
| 31825151 | 31825151 | PRJNA881257_P_NODE_16477_length_165_cov_0.896552_g16232_i0 | PRJNA881257 | 16477 | 165 | 0.896552 | 1.4793108 | Bacillus cereus | 1396 | Bacteria | Bacteria | 47 | 4.08e-4 | NR | MEC2463362.1 | 1396 | g16232 | i0 | 46.9 | 0.890909090909091 | 49 | 25 | 89.1 | 1 | 164 | 18 | 361 | 408 | MEC2463362.1 hypothetical protein [Bacillus cereus] | diamond | 147 | 47 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 32149811 | 32149811 | PRJNA881257_P_NODE_7778_length_253_cov_1.338235_g7533_i0 | PRJNA881257 | 7778 | 253 | 1.338235 | 3.38573455 | Bacteria | 2 | Bacteria | Bacteria | 52 | 2.23e-5 | NR | WP_412433729.1 | 1550024 | g7533 | i0 | 38.8 | 6.58102766798419 | 67 | 41 | 79.4 | 0 | 37 | 237 | 181 | 247 | WP_412433729.1 ISL3 family transposase [Ruthenibacterium lactatiformans] | diamond | 1665 | 52 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ruthenibacterium | Ruthenibacterium lactatiformans | ||
| 32647242 | 32647242 | PRJNA881257_P_NODE_16020_length_166_cov_0.888889_g15775_i0 | PRJNA881257 | 16020 | 166 | 0.888889 | 1.47555574 | Peptoniphilus rhinitidis | 1175452 | Bacteria | Bacteria | 117 | 1.55e-29 | NR | WP_010246929.1 | 1175452 | g15775 | i0 | 100 | 0.993975903614458 | 55 | 0 | 99.4 | 0 | 165 | 1 | 195 | 249 | WP_010246929.1 NAD(P)H-dependent oxidoreductase [Peptoniphilus rhinitidis] | diamond | 165 | 117 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus rhinitidis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;