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contig_metadata

37 rows where analysis = "diamond", bioproject = "PRJNA879314" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 37 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879314 · 37 ✖

analysis 1

  • diamond · 37 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2133266 2133266 PRJNA879314_P_NODE_8902_length_246_cov_0.901734_g8852_i0 PRJNA879314 8902 246 0.901734 2.21826564 Opitutus sp. 1913982 Bacteria Bacteria 137 2.02e-35   NR MEO6005919.1 1913982 g8852 i0 78 1.97560975609756 82 17 100 1 1 246 584 664 MEO6005919.1 hypothetical protein [Opitutus sp.] diamond 486 137 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
6344362 6344362 PRJNA879314_P_NODE_7745_length_248_cov_0.891429_g7695_i0 PRJNA879314 7745 248 0.891429 2.21074392 Pseudomonadati 3379134 Bacteria Bacteria 119 1.3e-30   NR MDE3275640.1 2026799 g7695 i0 70.7 1.98387096774194 82 16 99.2 1 247 2 39 112 MDE3275640.1 SDR family oxidoreductase [Verrucomicrobiota bacterium] diamond 492 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
11061514 11061514 PRJNA879314_P_NODE_5009_length_252_cov_0.871508_g4959_i0 PRJNA879314 5009 252 0.871508 2.19620016 Limisphaerales bacterium 2052186 Bacteria Bacteria 141 7.01e-37   NR MCI0745282.1 2052186 g4959 i0 79.5 8.89285714285714 83 17 98.8 0 250 2 125 207 MCI0745282.1 excinuclease ABC subunit A [Limisphaerales bacterium] diamond 2241 141 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales     Limisphaerales bacterium
14885899 14885899 PRJNA879314_P_NODE_6452_length_250_cov_0.881356_g6402_i0 PRJNA879314 6452 250 0.881356 2.20339 Bacteria 2 Bacteria Bacteria 152 2.48e-41   NR MCX6966628.1 2026799 g6402 i0 80.7 8.964 83 16 99.6 0 249 1 278 360 MCX6966628.1 hydroxylamine reductase [Verrucomicrobiota bacterium] diamond 2241 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
14885931 14885931 PRJNA879314_P_NODE_9232_length_245_cov_0.906977_g9182_i0 PRJNA879314 9232 245 0.906977 2.22209365 Bacteria 2 Bacteria Bacteria 89 4.67e-20   NR MCQ2364365.1 1872421 g9182 i0 48.8 2.00816326530612 82 40 99.2 2 244 2 48 128 MCQ2364365.1 metallophosphoesterase [Akkermansia sp.] diamond 492 89.7 0.992196209587514 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
14885933 14885933 PRJNA879314_P_NODE_9372_length_245_cov_0.906977_g9322_i0 PRJNA879314 9372 245 0.906977 2.22209365 Bacteria 2 Bacteria Bacteria 95.5 1.19e-22   NR MCU0785300.1 2026799 g9322 i0 69.1 3.28163265306122 68 21 83.3 0 244 41 103 170 MCU0785300.1 O-acetyl-ADP-ribose deacetylase [Verrucomicrobiota bacterium] diamond 804 95.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
16542938 16542938 PRJNA879314_P_NODE_5873_length_251_cov_0.876404_g5823_i0 PRJNA879314 5873 251 0.876404 2.19977404 Opitutaceae bacterium 2006848 Bacteria Bacteria 124 6.13e-31   NR MBE2213596.1 2006848 g5823 i0 79.5 5.92828685258964 83 17 99.2 0 249 1 290 372 MBE2213596.1 KUP/HAK/KT family potassium transporter [Opitutaceae bacterium] diamond 1488 124 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
18709260 18709260 PRJNA879314_P_NODE_5575_length_251_cov_0.876404_g5525_i0 PRJNA879314 5575 251 0.876404 2.19977404 Opitutaceae bacterium 2006848 Bacteria Bacteria 139 3.36e-36   NR MBE2214116.1 2006848 g5525 i0 81.7 1.97211155378486 82 15 98 0 2 247 120 201 MBE2214116.1 alginate lyase family protein [Opitutaceae bacterium] diamond 495 139 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
26611968 26611968 PRJNA879314_P_NODE_9261_length_245_cov_0.906977_g9211_i0 PRJNA879314 9261 245 0.906977 2.22209365 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 57.8 1.9e-7   NR WP_415910621.1 3398393 g9211 i0 73 0.453061224489796 37 10 45.3 0 133 243 24 60 WP_415910621.1 hypothetical protein [Oleiharenicola sp. Vm1] diamond 111 57.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1
26802029 26802029 PRJNA879314_P_NODE_10901_length_242_cov_0.923077_g10851_i0 PRJNA879314 10901 242 0.923077 2.23384634 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 134 3.0799999999999998e-34   NR MBE0542447.1 2026799 g10851 i0 80 3.96694214876033 80 16 99.2 0 3 242 625 704 MBE0542447.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 960 134 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27308351 27308351 PRJNA879314_P_NODE_4623_length_253_cov_0.866667_g4573_i0 PRJNA879314 4623 253 0.866667 2.19266751 Verrucomicrobia bacterium CG1_ 1805421 Bacteria Bacteria 58.5 1.13e-7   NR OIO60842.1 1805421 g4573 i0 75 1.1501976284585 32 8 37.9 0 1 96 440 471 OIO60842.1 MAG: F0F1 ATP synthase subunit beta [Verrucomicrobia bacterium CG1_02_43_26] diamond 291 58.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium CG1_02_43_26
27339903 27339903 PRJNA879314_P_NODE_10923_length_242_cov_0.923077_g10873_i0 PRJNA879314 10923 242 0.923077 2.23384634 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.4 0.0499   NR MFC1453596.1 2026799 g10873 i0 30.8 0.966942148760331 78 54 96.7 0 4 237 86 163 MFC1453596.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 234 42.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27371690 27371690 PRJNA879314_P_NODE_5083_length_252_cov_0.871508_g5033_i0 PRJNA879314 5083 252 0.871508 2.19620016 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 160 2.41e-45   NR MDE3275614.1 2026799 g5033 i0 97.6 0.988095238095238 83 2 98.8 0 251 3 178 260 MDE3275614.1 histidinol dehydrogenase [Verrucomicrobiota bacterium] diamond 249 160 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27371700 27371700 PRJNA879314_P_NODE_9503_length_245_cov_0.906977_g9453_i0 PRJNA879314 9503 245 0.906977 2.22209365 Opitutaceae bacterium 2006848 Bacteria Bacteria 135 6.93e-38   NR MBE2216046.1 2006848 g9453 i0 84 0.991836734693878 81 13 99.2 0 1 243 129 209 MBE2216046.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase [Opitutaceae bacterium] diamond 243 135 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27434761 27434761 PRJNA879314_P_NODE_8503_length_246_cov_0.901734_g8453_i0 PRJNA879314 8503 246 0.901734 2.21826564 Puniceicoccaceae bacterium 2026784 Bacteria Bacteria 67 6.95e-11   NR MEX0321994.1 2026784 g8453 i0 41 1.78048780487805 78 46 95.1 0 246 13 162 239 MEX0321994.1 hypothetical protein [Puniceicoccaceae bacterium] diamond 438 67 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae   Puniceicoccaceae bacterium
27624176 27624176 PRJNA879314_P_NODE_504_length_580_cov_1.323471_g455_i0 PRJNA879314 504 580 1.323471 7.6761318 Akkermansia sp. 1872421 Bacteria Bacteria 166 3.41e-45   NR MBR2126057.1 1872421 g455 i0 54.7 1.40172413793103 150 68 77.6 0 121 570 71 220 MBR2126057.1 hypothetical protein [Akkermansia sp.] diamond 813 166 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae Akkermansia Akkermansia sp.
28034592 28034592 PRJNA879314_P_NODE_6005_length_251_cov_0.876404_g5955_i0 PRJNA879314 6005 251 0.876404 2.19977404 Opitutaceae bacterium 2006848 Bacteria Bacteria 84 4.64e-17   NR HZL46437.1 2006848 g5955 i0 85.1 2.24701195219123 47 7 56.2 0 251 111 267 313 HZL46437.1 glycosyltransferase family 2 protein [Opitutaceae bacterium] diamond 564 84 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28381741 28381741 PRJNA879314_P_NODE_4346_length_253_cov_0.866667_g4296_i0 PRJNA879314 4346 253 0.866667 2.19266751 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 132 5.35e-36   NR MDE3275600.1 2026799 g4296 i0 78.6 0.99604743083004 84 18 99.6 0 2 253 151 234 MDE3275600.1 tryptophan synthase subunit alpha [Verrucomicrobiota bacterium] diamond 252 132 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28539867 28539867 PRJNA879314_P_NODE_6767_length_249_cov_0.886364_g6717_i0 PRJNA879314 6767 249 0.886364 2.20704636 Opitutaceae bacterium 2006848 Bacteria Bacteria 134 2.3e-35   NR MFT3830616.1 2006848 g6717 i0 87.3 1.62650602409639 71 9 85.5 0 248 36 343 413 MFT3830616.1 S41 family peptidase [Opitutaceae bacterium] diamond 405 134 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
28729118 28729118 PRJNA879314_P_NODE_4467_length_253_cov_0.866667_g4417_i0 PRJNA879314 4467 253 0.866667 2.19266751 Opitutus terrae 107709 Bacteria Bacteria 84.7 1.53e-17   NR WP_012374405.1 107709 g4417 i0 78 0.592885375494071 50 11 59.3 0 1 150 226 275 WP_012374405.1 PhzF family phenazine biosynthesis protein [Opitutus terrae] diamond 150 84.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus terrae
29044974 29044974 PRJNA879314_P_NODE_9188_length_245_cov_0.906977_g9138_i0 PRJNA879314 9188 245 0.906977 2.22209365 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 81.6 7.81e-16   NR MEI8037651.1 2026799 g9138 i0 58.8 0.83265306122449 68 28 83.3 0 27 230 125 192 MEI8037651.1 cadherin-like beta sandwich domain-containing protein [Verrucomicrobiota bacterium] diamond 204 81.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29589241 29589241 PRJNA879314_P_NODE_10950_length_242_cov_0.923077_g10900_i0 PRJNA879314 10950 242 0.923077 2.23384634 Pseudomonadati 3379134 Bacteria Bacteria 70.5 6.09e-12   NR MDE3275648.1 2026799 g10900 i0 56.3 1.97107438016529 80 34 99.2 1 2 241 407 485 MDE3275648.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 477 71.2 0.990168539325843 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29675956 29675956 PRJNA879314_P_NODE_3210_length_281_cov_1.221154_g3160_i0 PRJNA879314 3210 281 1.221154 3.43144274 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.1 1.23e-5   NR MES2697149.1 2026799 g3160 i0 44.1 0.99288256227758 93 34 80.1 5 226 2 4 96 MES2697149.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 279 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30118368 30118368 PRJNA879314_P_NODE_4452_length_253_cov_0.866667_g4402_i0 PRJNA879314 4452 253 0.866667 2.19266751 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 140 2.2399999999999998e-38   NR MDE3275372.1 2026799 g4402 i0 78.3 0.984189723320158 83 18 98.4 0 251 3 234 316 MDE3275372.1 LptF/LptG family permease [Verrucomicrobiota bacterium] diamond 249 140 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30308552 30308552 PRJNA879314_P_NODE_11032_length_242_cov_0.923077_g10982_i0 PRJNA879314 11032 242 0.923077 2.23384634 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 129 5.96e-34   NR MBI5693344.1 2026799 g10982 i0 80.3 1.67355371900826 66 13 81.8 0 10 207 277 342 MBI5693344.1 glycosylase [Verrucomicrobiota bacterium] diamond 405 129 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30718718 30718718 PRJNA879314_P_NODE_10374_length_243_cov_0.917647_g10324_i0 PRJNA879314 10374 243 0.917647 2.22988221 Limisphaerales bacterium 2052186 Bacteria Bacteria 116 8.78e-30   NR TXT43887.1 2052186 g10324 i0 71.8 2.88888888888889 78 22 96.3 0 9 242 88 165 TXT43887.1 MAG: int [Limisphaerales bacterium] diamond 702 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales     Limisphaerales bacterium
30750491 30750491 PRJNA879314_P_NODE_6394_length_250_cov_0.881356_g6344_i0 PRJNA879314 6394 250 0.881356 2.20339 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 119 5.97e-29   NR MDR0533747.1 2026801 g6344 i0 55.4 4.98 83 37 99.6 0 249 1 589 671 MDR0533747.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 1245 119 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30781980 30781980 PRJNA879314_P_NODE_5594_length_251_cov_0.876404_g5544_i0 PRJNA879314 5594 251 0.876404 2.19977404 Opitutales bacterium 2026772 Bacteria Bacteria 45.4 0.0041   NR MCG8526610.1 2026772 g5544 i0 43.1 0.776892430278884 65 24 74.1 2 45 230 2 56 MCG8526610.1 glycosyltransferase family 2 protein [Opitutales bacterium] diamond 195 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
31319198 31319198 PRJNA879314_P_NODE_5055_length_252_cov_0.871508_g5005_i0 PRJNA879314 5055 252 0.871508 2.19620016 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 100 1.74e-22   NR HBJ59637.1 2026799 g5005 i0 56 1 84 35 100 1 252 1 404 485 HBJ59637.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 252 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31350990 31350990 PRJNA879314_P_NODE_9496_length_245_cov_0.906977_g9446_i0 PRJNA879314 9496 245 0.906977 2.22209365 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 145 1.6099999999999996e-41   NR MDE3274443.1 2026799 g9446 i0 82.5 0.979591836734694 80 14 98 0 2 241 24 103 MDE3274443.1 DNA repair protein RecO [Verrucomicrobiota bacterium] diamond 240 145 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31445775 31445775 PRJNA879314_P_NODE_2816_length_292_cov_1.223744_g2766_i0 PRJNA879314 2816 292 1.223744 3.57333248 Opitutaceae bacterium 2006848 Bacteria Bacteria 161 1.32e-45   NR MDX2185388.1 2006848 g2766 i0 82.3 0.986301369863014 96 17 98.6 0 290 3 262 357 MDX2185388.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Opitutaceae bacterium] diamond 288 161 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31643366 31643366 PRJNA879314_P_NODE_6856_length_249_cov_0.886364_g6806_i0 PRJNA879314 6856 249 0.886364 2.20704636 Opitutaceae 134623 Bacteria Bacteria 140 7.029999999999999e-37   NR HWL16178.1 1913982 g6806 i0 80.7 11 83 16 100 0 1 249 131 213 HWL16178.1 tetratricopeptide repeat protein [Opitutus sp.] diamond 2739 141 0.99290780141844 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
31793479 31793479 PRJNA879314_P_NODE_8957_length_246_cov_0.901734_g8907_i0 PRJNA879314 8957 246 0.901734 2.21826564 Opitutia bacterium 2026771 Bacteria Bacteria 137 3.26e-36   NR MBI2514098.1 2026771 g8907 i0 85 0.975609756097561 80 12 97.6 0 245 6 216 295 MBI2514098.1 hypothetical protein [Opitutia bacterium] diamond 240 137 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia       Opitutia bacterium
32054737 32054737 PRJNA879314_P_NODE_2818_length_292_cov_1.173516_g2768_i0 PRJNA879314 2818 292 1.173516 3.42666672 Pseudomonadati 3379134 Bacteria Bacteria 181 1.19e-50   NR OQC59591.1 1852925 g2768 i0 89.7 1.99315068493151 97 10 99.7 0 2 292 225 321 OQC59591.1 MAG: Type III restriction enzyme, res subunit [Verrucomicrobia bacterium ADurb.Bin018] diamond 582 181 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium ADurb.Bin018
32173552 32173552 PRJNA879314_P_NODE_10238_length_244_cov_0.900585_g10188_i0 PRJNA879314 10238 244 0.900585 2.1974274 Nibricoccus sp. 2576892 Bacteria Bacteria 152 2.51e-41   NR MFT3781688.1 2576892 g10188 i0 92.6 0.995901639344262 81 6 99.6 0 244 2 240 320 MFT3781688.1 DNA polymerase/3'-5' exonuclease PolX [Nibricoccus sp.] diamond 243 152 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Nibricoccus Nibricoccus sp.
32205051 32205051 PRJNA879314_P_NODE_10698_length_243_cov_0.917647_g10648_i0 PRJNA879314 10698 243 0.917647 2.22988221 Lacunisphaera sp. 1961806 Bacteria Bacteria 160 1.4e-45   NR MDI1251294.1 1961806 g10648 i0 96.3 0.987654320987654 80 3 98.8 0 241 2 282 361 MDI1251294.1 M48 family metallopeptidase [Lacunisphaera sp.] diamond 240 160 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
32836396 32836396 PRJNA879314_P_NODE_4060_length_259_cov_1.677419_g4010_i0 PRJNA879314 4060 259 1.677419 4.34451521 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47.4 7.25e-4   NR MFM1769337.1 2026799 g4010 i0 53.8 0.451737451737452 39 18 45.2 0 259 143 79 117 MFM1769337.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 117 47.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;