RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA879314" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA879314 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26865731 26865731 PRJNA879314_P_NODE_10501_length_243_cov_0.917647_g10451_i0 PRJNA879314 10501 243 0.917647 2.22988221 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 156 1.8199999999999998e-43   NR MBR2998197.1 2026720 g10451 i0 95.1 19.7901234567901 81 4 100 0 243 1 365 445 MBR2998197.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Candidatus Saccharibacteria bacterium] diamond 4809 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27592560 27592560 PRJNA879314_P_NODE_11044_length_242_cov_0.923077_g10994_i0 PRJNA879314 11044 242 0.923077 2.23384634 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 87.4 6.95e-18   NR HJQ08689.1 2973664 g10994 i0 58.2 0.830578512396694 67 28 83.1 0 242 42 875 941 HJQ08689.1 glycosyltransferase family 4 protein [Candidatus Saccharimonadales bacterium] diamond 201 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27719150 27719150 PRJNA879314_P_NODE_9664_length_245_cov_0.860465_g9614_i0 PRJNA879314 9664 245 0.860465 2.10813925 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 142 2.529999999999999e-38   NR MDB5184471.1 2026720 g9614 i0 91.4 15.869387755102 81 7 99.2 0 244 2 303 383 MDB5184471.1 Replicative helicase [Candidatus Saccharibacteria bacterium] diamond 3888 142 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28003077 28003077 PRJNA879314_P_NODE_3645_length_270_cov_2.147208_g3595_i0 PRJNA879314 3645 270 2.147208 5.7974616 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 55.8 2.76e-8   NR MCL2280822.1 2026720 g3595 i0 88.2 0.377777777777778 34 4 37.8 0 1 102 12 45 MCL2280822.1 50S ribosomal protein L34 [Candidatus Saccharibacteria bacterium] diamond 102 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31896523 31896523 PRJNA879314_P_NODE_6877_length_249_cov_0.886364_g6827_i0 PRJNA879314 6877 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 152 3.13e-44   NR MBQ9684238.1 2026720 g6827 i0 96.3 1.95180722891566 81 3 97.6 0 247 5 122 202 MBQ9684238.1 tetratricopeptide repeat protein [Candidatus Saccharibacteria bacterium] diamond 486 152 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32078400 32078400 PRJNA879314_P_NODE_10598_length_243_cov_0.917647_g10548_i0 PRJNA879314 10598 243 0.917647 2.22988221 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 163 2.41e-45   NR MBQ1564167.1 2026720 g10548 i0 92.5 8.88888888888889 80 6 98.8 0 2 241 404 483 MBQ1564167.1 aspartate--tRNA ligase [Candidatus Saccharibacteria bacterium] diamond 2160 163 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;