RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA879314" and tax_phylum = "Candidatus Nealsoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nealsoniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA879314 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28318570 28318570 PRJNA879314_P_NODE_4746_length_253_cov_0.866667_g4696_i0 PRJNA879314 4746 253 0.866667 2.19266751 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 94 4.18e-20   NR NQU24816.1 2093793 g4696 i0 52.9 1.00790513833992 85 38 99.6 2 1 252 482 565 NQU24816.1 lamin tail domain-containing protein [Candidatus Nealsonbacteria bacterium] diamond 255 94 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium
29147902 29147902 PRJNA879314_P_NODE_889_length_450_cov_0.968170_g839_i0 PRJNA879314 889 450 0.96817 4.356765 root 1 Root_unresolved Root_unresolved 140 3.22e-36   NR PIU43944.1 1974702 g839 i0 51 1.93333333333333 145 71 96.7 0 2 436 306 450 PIU43944.1 MAG: hypothetical protein COS96_01835, partial [Candidatus Nealsonbacteria bacterium CG07_land_8_20_14_0_80_39_13] diamond 870 140 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium CG07_land_8_20_14_0_80_39_13
30781971 30781971 PRJNA879314_P_NODE_10194_length_244_cov_0.912281_g10144_i0 PRJNA879314 10194 244 0.912281 2.22596564 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 75.1 7.18e-14   NR MDP3990725.1 2093793 g10144 i0 48.6 0.909836065573771 74 38 91 0 22 243 53 126 MDP3990725.1 EamA family transporter [Candidatus Nealsonbacteria bacterium] diamond 222 75.1 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;