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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA879067" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 9 ✖

bioproject 1

  • PRJNA879067 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16158513 16158513 PRJNA879067_P_NODE_69593_length_390_cov_3.324921_g66108_i0 PRJNA879067 69593 390 3.324921 12.9671919 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 126 2.33e-35   NR MDF2738432.1 2169593 g66108 i0 91.5 0.907692307692308 59 5 45.4 0 221 45 1 59 MDF2738432.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 354 126 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27055375 27055375 PRJNA879067_P_NODE_15322_length_1209_cov_8.209507_g12690_i0 PRJNA879067 15322 1209 8.209507 99.25293963 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 212 1.26e-61   NR MDW3611096.1 2169593 g12690 i0 96.3 0.267990074441687 108 4 26.8 0 1188 865 187 294 MDW3611096.1 DNA repair and recombination protein RadA [Nitrososphaeraceae archaeon] diamond 324 212 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
27813632 27813632 PRJNA879067_P_NODE_103384_length_251_cov_0.865169_g99898_i0 PRJNA879067 103384 251 0.865169 2.17157419 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 70.9 2.92e-13   NR HTY77714.1 3045160 g99898 i0 74.4 0.51394422310757 43 11 51.4 0 1 129 80 122 HTY77714.1 TRAP transporter small permease [Candidatus Bathyarchaeia archaeon] diamond 129 70.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
29486556 29486556 PRJNA879067_P_NODE_102530_length_253_cov_1.205556_g99044_i0 PRJNA879067 102530 253 1.205556 3.05005668 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 58.9 5.61e-9   NR HET9806997.1 2169593 g99044 i0 62.8 0.509881422924901 43 16 51 0 130 2 6 48 HET9806997.1 P-loop NTPase fold protein [Nitrososphaeraceae archaeon] diamond 129 58.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29644271 29644271 PRJNA879067_P_NODE_34270_length_697_cov_3.482372_g30889_i0 PRJNA879067 34270 697 3.482372 24.27213284 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 65.9 1.53e-10   NR MDW3605092.1 2169593 g30889 i0 91.4 0.288378766140603 35 3 15.1 0 524 628 1 35 MDW3605092.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 201 65.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
29834140 29834140 PRJNA879067_P_NODE_79831_length_340_cov_0.996255_g76345_i0 PRJNA879067 79831 340 0.996255 3.387267 Nitrosopumilus sp. 2024843 Archaea Archaea 125 1.0599999999999998e-31   NR MDA7940732.1 2024843 g76345 i0 65.4 2.12647058823529 81 28 71.5 0 14 256 319 399 MDA7940732.1 multicopper oxidase domain-containing protein [Nitrosopumilus sp.] diamond 723 125 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31097784 31097784 PRJNA879067_P_NODE_70655_length_385_cov_0.900641_g67170_i0 PRJNA879067 70655 385 0.900641 3.46746785 Desulfurococcales archaeon 2480821 Archaea Archaea 68.9 3.39e-12   NR MEB3780172.1 2480821 g67170 i0 43.5 0.662337662337662 85 42 66.2 1 3 257 33 111 MEB3780172.1 YbjQ family protein [Desulfurococcales archaeon] diamond 255 68.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales     Desulfurococcales archaeon
31825110 31825110 PRJNA879067_P_NODE_76997_length_352_cov_2.856631_g73511_i0 PRJNA879067 76997 352 2.856631 10.05534112 Nitrososphaerota archaeon 2026795 Archaea Archaea 101 2.41e-22   NR MEM3063527.1 2026795 g73511 i0 47.3 0.954545454545455 112 59 95.5 0 337 2 357 468 MEM3063527.1 DNA polymerase [Nitrososphaerota archaeon] diamond 336 101 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32686895 32686895 PRJNA879067_P_NODE_92760_length_288_cov_1.790698_g89274_i0 PRJNA879067 92760 288 1.790698 5.15721024 root 1 Root_unresolved Root_unresolved 65.9 1.14e-10   NR HYF75015.1 2109671 g89274 i0 66.7 3.20833333333333 45 11 46.9 1 288 154 75 115 HYF75015.1 nucleoside 2-deoxyribosyltransferase domain-containing protein [Candidatus Nitrosocosmicus sp.] diamond 924 65.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;