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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA879067" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 8 ✖

bioproject 1

  • PRJNA879067 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19090611 19090611 PRJNA879067_P_NODE_59895_length_450_cov_2.506631_g56410_i0 PRJNA879067 59895 450 2.506631 11.2798395 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 95.9 1.03e-19   NR WP_296846977.1 253161 g56410 i0 39.8 0.886666666666667 133 73 88.7 3 32 430 1063 1188 WP_296846977.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 399 95.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
23808137 23808137 PRJNA879067_P_NODE_74799_length_363_cov_1.593103_g71313_i0 PRJNA879067 74799 363 1.593103 5.78296389 Thermoplasmata archaeon 1906666 Archaea Archaea 120 9.35e-30   NR HLE45617.1 1906666 g71313 i0 54.1 0.900826446280992 109 50 90.1 0 6 332 73 181 HLE45617.1 multicopper oxidase domain-containing protein [Thermoplasmata archaeon] diamond 327 120 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27031605 27031605 PRJNA879067_P_NODE_2602_length_3011_cov_8.504084_g1756_i0 PRJNA879067 2602 3011 8.504084 256.05796924 root 1 Root_unresolved Root_unresolved 245 1.82e-69   NR MBC8520911.1 2268195 g1756 i0 43.2 3.21122550647625 315 156 31 8 1503 2435 2 297 MBC8520911.1 dTDP-glucose 4,6-dehydratase [Methanomicrobia archaeon] diamond 9669 245 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia       Methanomicrobia archaeon
27181529 27181529 PRJNA879067_P_NODE_83042_length_326_cov_2.367589_g79556_i0 PRJNA879067 83042 326 2.367589 7.71834014 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 137 1e-37   NR WP_294007930.1 253161 g79556 i0 100 0.690184049079755 75 0 69 0 227 3 1 75 WP_294007930.1 hypothetical protein [uncultured Methanobrevibacter sp.] diamond 225 137 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
28192049 28192049 PRJNA879067_P_NODE_92846_length_288_cov_1.358140_g89360_i0 PRJNA879067 92846 288 1.35814 3.9114432 Halorubrum sp. SP3 1537265 Archaea Archaea 82 2.88e-18   NR WP_206750781.1 1537265 g89360 i0 57.7 0.8125 78 9 81.3 1 34 267 1 54 WP_206750781.1 hypothetical protein, partial [Halorubrum sp. SP3] diamond 234 82 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. SP3
29486572 29486572 PRJNA879067_P_NODE_33090_length_713_cov_8.451562_g29723_i0 PRJNA879067 33090 713 8.451562 60.25963706 Methanosarcinaceae archaeon 1945595 Archaea Archaea 73.2 8.08e-11   NR NOR47198.1 1945595 g29723 i0 38.8 0.488078541374474 116 66 47.1 2 336 1 367 481 NOR47198.1 hypothetical protein [Methanosarcinaceae archaeon] diamond 348 73.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae   Methanosarcinaceae archaeon
30971675 30971675 PRJNA879067_P_NODE_43814_length_582_cov_2.630648_g40354_i0 PRJNA879067 43814 582 2.630648 15.31037136 Candidatus Methanoperedens nitroreducens 1392997 Archaea Archaea 139 1.49e-38   NR WP_048092242.1 1392998 g40354 i0 66.7 1.06701030927835 105 33 54.1 1 243 557 1 103 WP_048092242.1 phage tail protein [Candidatus Methanoperedens nitroreducens] diamond 621 139 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens nitratireducens
32773383 32773383 PRJNA879067_P_NODE_70960_length_383_cov_1.790323_g67475_i0 PRJNA879067 70960 383 1.790323 6.85693709 Methanobrevibacter smithii 2173 Archaea Archaea 64.3 2.41e-9   NR WP_404809095.1 2173 g67475 i0 30 1.89556135770235 130 43 64.2 2 330 85 122 251 WP_404809095.1 hypothetical protein [Methanobrevibacter smithii] diamond 726 64.3 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;