contig_metadata
14 rows where analysis = "diamond", bioproject = "PRJNA879067" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3407057 | 3407057 | PRJNA879067_P_NODE_84443_length_320_cov_3.016194_g80957_i0 | PRJNA879067 | 84443 | 320 | 3.016194 | 9.6518208 | Fusobacterium | 848 | Bacteria | Bacteria | 88.2 | 2.39e-18 | NR | WP_316090402.1 | 68766 | g80957 | i0 | 72.4 | 1.63125 | 58 | 16 | 54.4 | 0 | 294 | 121 | 241 | 298 | WP_316090402.1 ABC transporter substrate-binding protein [Fusobacterium sp.] | diamond | 522 | 88.2 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 7232226 | 7232226 | PRJNA879067_P_NODE_13666_length_1296_cov_3.291087_g11161_i0 | PRJNA879067 | 13666 | 1296 | 3.291087 | 42.65248752 | Fusobacterium | 848 | Bacteria | Bacteria | 800 | 3.6499999999999993e-289 | NR | WP_235244229.1 | 848 | g11161 | i0 | 97.4 | 0.997685185185185 | 431 | 11 | 99.8 | 0 | 4 | 1296 | 1 | 431 | WP_235244229.1 MULTISPECIES: LytS/YhcK type 5TM receptor domain-containing protein [Fusobacterium] | diamond | 1293 | 800 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | |||
| 16157192 | 16157192 | PRJNA879067_P_NODE_25773_length_850_cov_6.415701_g22571_i0 | PRJNA879067 | 25773 | 850 | 6.415701 | 54.5334585 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 341 | 1.65e-113 | NR | WP_336015340.1 | 76857 | g22571 | i0 | 85.1 | 0.709411764705882 | 201 | 30 | 70.9 | 0 | 248 | 850 | 1 | 201 | WP_336015340.1 hypothetical protein [Fusobacterium polymorphum] | diamond | 603 | 341 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 18706804 | 18706804 | PRJNA879067_P_NODE_53055_length_500_cov_2.320843_g49571_i0 | PRJNA879067 | 53055 | 500 | 2.320843 | 11.604215 | Fusobacteriaceae bacterium | 2053555 | Bacteria | Bacteria | 306 | 1.18e-100 | NR | MBP6408967.1 | 2053555 | g49571 | i0 | 100 | 0.942 | 157 | 0 | 94.2 | 0 | 472 | 2 | 99 | 255 | MBP6408967.1 TolC family protein [Fusobacteriaceae bacterium] | diamond | 471 | 306 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacteriaceae bacterium | |||
| 22531948 | 22531948 | PRJNA879067_P_NODE_47118_length_550_cov_2.561845_g43645_i0 | PRJNA879067 | 47118 | 550 | 2.561845 | 14.0901475 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 119 | 1.49e-28 | NR | WP_330112627.1 | 188913 | g43645 | i0 | 44.4 | 0.981818181818182 | 180 | 94 | 96 | 3 | 10 | 537 | 127 | 304 | WP_330112627.1 GIY-YIG nuclease family protein [Cetobacterium somerae] | diamond | 540 | 119 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 26897226 | 26897226 | PRJNA879067_P_NODE_110301_length_242_cov_0.911243_g106815_i0 | PRJNA879067 | 110301 | 242 | 0.911243 | 2.20520806 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 124 | 5.419999999999999e-31 | NR | WP_053393422.1 | 712357 | g106815 | i0 | 88.6 | 0.867768595041322 | 70 | 8 | 86.8 | 0 | 210 | 1 | 942 | 1011 | WP_053393422.1 alpha-amylase family glycosyl hydrolase [Leptotrichia sp. oral taxon 212] | diamond | 210 | 124 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 26928744 | 26928744 | PRJNA879067_P_NODE_41042_length_611_cov_3.401487_g37590_i0 | PRJNA879067 | 41042 | 611 | 3.401487 | 20.78308557 | Fusobacterium sp. | 68766 | Bacteria | Bacteria | 285 | 8.939999999999997e-94 | NR | MFR3298607.1 | 68766 | g37590 | i0 | 64.8 | 2.93126022913257 | 199 | 68 | 97.2 | 2 | 602 | 9 | 69 | 266 | MFR3298607.1 cobyrinate a,c-diamide synthase [Fusobacterium sp.] | diamond | 1791 | 285 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 26999844 | 26999844 | PRJNA879067_P_NODE_41322_length_607_cov_25.453184_g37870_i0 | PRJNA879067 | 41322 | 607 | 25.453184 | 154.50082688 | Fusobacterium | 848 | Bacteria | Bacteria | 184 | 6.17e-50 | NR | WP_291281889.1 | 68766 | g37870 | i0 | 54.3 | 3.87479406919275 | 199 | 91 | 98.4 | 0 | 598 | 2 | 656 | 854 | WP_291281889.1 filamentous hemagglutinin N-terminal domain-containing protein, partial [Fusobacterium sp.] | diamond | 2352 | 184 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 27655743 | 27655743 | PRJNA879067_P_NODE_93404_length_286_cov_1.281690_g89918_i0 | PRJNA879067 | 93404 | 286 | 1.28169 | 3.6656334 | Fusobacterium perfoetens | 852 | Bacteria | Bacteria | 86.7 | 1.38e-18 | NR | WP_235235498.1 | 852 | g89918 | i0 | 92.9 | 0.440559440559441 | 42 | 3 | 44.1 | 0 | 2 | 127 | 169 | 210 | WP_235235498.1 O-methyltransferase [Fusobacterium perfoetens] | diamond | 126 | 86.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 28160890 | 28160890 | PRJNA879067_P_NODE_32385_length_725_cov_1.369632_g29031_i0 | PRJNA879067 | 32385 | 725 | 1.369632 | 9.929832 | unclassified Cetobacterium | 2630983 | Bacteria | Bacteria | 439 | 3.52e-154 | NR | WP_197053374.1 | 2630983 | g29031 | i0 | 100 | 0.964137931034483 | 233 | 0 | 96.4 | 0 | 701 | 3 | 42 | 274 | WP_197053374.1 MULTISPECIES: hydroxyethylthiazole kinase [unclassified Cetobacterium] | diamond | 699 | 439 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | |||
| 28263290 | 28263290 | PRJNA879067_P_NODE_81926_length_331_cov_1.193798_g78440_i0 | PRJNA879067 | 81926 | 331 | 1.193798 | 3.95147138 | Fusobacterium | 848 | Bacteria | Bacteria | 202 | 9.55e-59 | NR | WP_235235894.1 | 852 | g78440 | i0 | 90.9 | 3.98791540785498 | 110 | 10 | 99.7 | 0 | 330 | 1 | 29 | 138 | WP_235235894.1 ferrous iron transport protein B [Fusobacterium perfoetens] | diamond | 1320 | 203 | 0.995073891625616 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 29739123 | 29739123 | PRJNA879067_P_NODE_30430_length_757_cov_5.505848_g27115_i0 | PRJNA879067 | 30430 | 757 | 5.505848 | 41.67926936 | Fusobacterium sp. | 68766 | Bacteria | Bacteria | 508 | 1.0899999999999993e-168 | NR | WP_294653854.1 | 68766 | g27115 | i0 | 100 | 1.87846763540291 | 237 | 0 | 93.9 | 0 | 726 | 16 | 922 | 1158 | WP_294653854.1 autotransporter outer membrane beta-barrel domain-containing protein [Fusobacterium sp.] | diamond | 1422 | 508 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium sp. | ||
| 31359005 | 31359005 | PRJNA879067_P_NODE_98796_length_267_cov_1.211340_g95310_i0 | PRJNA879067 | 98796 | 267 | 1.21134 | 3.2342778 | Fusobacterium | 848 | Bacteria | Bacteria | 107 | 3.34e-27 | NR | MCF2612674.1 | 852 | g95310 | i0 | 98.2 | 1.23595505617978 | 55 | 1 | 61.8 | 0 | 165 | 1 | 1 | 55 | MCF2612674.1 transposase [Fusobacterium perfoetens] | diamond | 330 | 107 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium perfoetens | ||
| 32458244 | 32458244 | PRJNA879067_P_NODE_60999_length_443_cov_1.664865_g57514_i0 | PRJNA879067 | 60999 | 443 | 1.664865 | 7.37535195 | Fusobacterium | 848 | Bacteria | Bacteria | 266 | 5.59e-85 | NR | WP_170186764.1 | 848 | g57514 | i0 | 89.1 | 0.99548532731377 | 147 | 16 | 99.5 | 0 | 3 | 443 | 306 | 452 | WP_170186764.1 MULTISPECIES: YfcC family protein [Fusobacterium] | diamond | 441 | 266 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;