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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA879067" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 33 ✖

bioproject 1

  • PRJNA879067 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
854356 854356 PRJNA879067_P_NODE_20141_length_1005_cov_1.725322_g17212_i0 PRJNA879067 20141 1005 1.725322 17.3394861 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 146 8.66e-40   NR HRN86953.1 2099670 g17212 i0 78.6 0.570149253731343 98 20 29.3 1 336 43 1 97 HRN86953.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 573 146 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
4684596 4684596 PRJNA879067_P_NODE_84184_length_321_cov_2.870968_g80698_i0 PRJNA879067 84184 321 2.870968 9.21580728 Minisyncoccota bacterium 2053589 Bacteria Bacteria 73.2 7.22e-13   NR HEY4483628.1 2053589 g80698 i0 54.5 1.7196261682243 55 25 51.4 0 53 217 183 237 HEY4483628.1 M14 family zinc carboxypeptidase [Candidatus Paceibacterota bacterium] diamond 552 73.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
4684909 4684909 PRJNA879067_P_NODE_95904_length_277_cov_1.509804_g92418_i0 PRJNA879067 95904 277 1.509804 4.18215708 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 138 2.07e-36   NR RAL56118.1 1914866 g92418 i0 90.3 0.779783393501805 72 7 78 0 29 244 1 72 RAL56118.1 hypothetical protein BLM37_01115 [Candidatus Gracilibacteria bacterium GN02-873] diamond 216 138 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
9781644 9781644 PRJNA879067_P_NODE_103688_length_250_cov_1.887006_g100202_i0 PRJNA879067 103688 250 1.887006 4.717515 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 113 2.84e-30   NR RKW00526.1 1917697 g100202 i0 94.6 0.672 56 3 67.2 0 227 60 73 128 RKW00526.1 MAG: ATP-binding protein, partial [Candidatus Saccharimonas sp.] diamond 168 113 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
9782301 9782301 PRJNA879067_P_NODE_24148_length_889_cov_5.637255_g21014_i0 PRJNA879067 24148 889 5.637255 50.11519695 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 434 4.8899999999999984e-151   NR MBR3377935.1 2026720 g21014 i0 89.6 1.62654668166479 241 25 81.3 0 723 1 1 241 MBR3377935.1 50S ribosomal protein L2 [Candidatus Saccharibacteria bacterium] diamond 1446 434 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
17433605 17433605 PRJNA879067_P_NODE_54894_length_486_cov_2.111380_g51409_i0 PRJNA879067 54894 486 2.11138 10.2613068 Patescibacteria group bacterium 2052139 Bacteria Bacteria 143 8.26e-38   NR MDQ5982092.1 2052139 g51409 i0 48.3 1.81481481481481 147 75 90.7 1 443 3 58 203 MDQ5982092.1 hypothetical protein [Patescibacteria group bacterium] diamond 882 143 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
19982108 19982108 PRJNA879067_P_NODE_54796_length_486_cov_9.038741_g51311_i0 PRJNA879067 54796 486 9.038741 43.92828126 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 246 1.46e-76   NR RKW23805.1 2044595 g51311 i0 86.1 0.932098765432099 151 21 93.2 0 455 3 19 169 RKW23805.1 MAG: hypothetical protein D8B46_02710 [Candidatus Altimarinota bacterium] diamond 453 246 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
21256936 21256936 PRJNA879067_P_NODE_36657_length_663_cov_10.644068_g33241_i0 PRJNA879067 36657 663 10.644068 70.57017084 Bacteria 2 Bacteria Bacteria 203 1.2e-59   NR KKS23690.1 1618667 g33241 i0 89.3 6.72850678733032 103 11 46.6 0 270 578 1 103 KKS23690.1 MAG: Glycine-tRNA ligase [Candidatus Jorgensenbacteria bacterium GW2011_GWF2_41_8] diamond 4461 204 0.995098039215686 Bacteria Bacteria candidate phyla   Candidatus Joergenseniibacteriota         Candidatus Jorgensenbacteria bacterium GW2011_GWF2_41_8
21258604 21258604 PRJNA879067_P_NODE_97377_length_272_cov_1.376884_g93891_i0 PRJNA879067 97377 272 1.376884 3.74512448 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 134 1.63e-36   NR HSW90672.1 2973664 g93891 i0 71.9 1.94117647058824 89 25 98.2 0 268 2 33 121 HSW90672.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Candidatus Saccharimonadales bacterium] diamond 528 134 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
24190793 24190793 PRJNA879067_P_NODE_79359_length_342_cov_1.460967_g75873_i0 PRJNA879067 79359 342 1.460967 4.99650714 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 176 2.35e-50   NR MEA2647782.1 2785449 g75873 i0 83.7 0.912280701754386 104 17 91.2 0 30 341 108 211 MEA2647782.1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit [Candidatus Binataceae bacterium] diamond 312 176 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
26991778 26991778 PRJNA879067_P_NODE_18562_length_1061_cov_4.682186_g15721_i0 PRJNA879067 18562 1061 4.682186 49.67799346 Patescibacteria group bacterium 2052139 Bacteria Bacteria 396 3.95e-131   NR GIW64209.1 2052139 g15721 i0 98.5 0.571159283694628 202 3 57.1 0 630 25 341 542 GIW64209.1 MAG: hypothetical protein KatS3mg092_0142 [Patescibacteria group bacterium] diamond 606 396 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27624154 27624154 PRJNA879067_P_NODE_89764_length_299_cov_2.725664_g86278_i0 PRJNA879067 89764 299 2.725664 8.14973536 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 71.6 5.05e-12   NR NCC19523.1 2026720 g86278 i0 42.4 0.923076923076923 92 52 91.3 1 2 274 463 554 NCC19523.1 RNA-directed DNA polymerase [Candidatus Saccharibacteria bacterium] diamond 276 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28003039 28003039 PRJNA879067_P_NODE_108685_length_244_cov_0.900585_g105199_i0 PRJNA879067 108685 244 0.900585 2.1974274 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.9 2.47e-4   NR MFA5013053.1 2053589 g105199 i0 34.6 0.995901639344262 81 40 83.6 2 27 230 411 491 MFA5013053.1 polysaccharide deacetylase family protein [Candidatus Paceibacterota bacterium] diamond 243 48.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28034555 28034555 PRJNA879067_P_NODE_42165_length_599_cov_2.621673_g38709_i0 PRJNA879067 42165 599 2.621673 15.70382127 Patescibacteria group bacterium 2052139 Bacteria Bacteria 55.5 1.48e-5   NR MBU3935150.1 2052139 g38709 i0 38.8 1.3322203672788 98 45 49.1 3 3 296 53 135 MBU3935150.1 methyltransferase domain-containing protein [Patescibacteria group bacterium] diamond 798 55.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28571110 28571110 PRJNA879067_P_NODE_93967_length_284_cov_1.208531_g90481_i0 PRJNA879067 93967 284 1.208531 3.43222804 Minisyncoccota bacterium 2053589 Bacteria Bacteria 108 6.0099999999999995e-25   NR HRY51571.1 2053589 g90481 i0 70.5 0.823943661971831 78 23 82.4 0 235 2 3 80 HRY51571.1 DEAD/DEAH box helicase family protein [Candidatus Paceibacterota bacterium] diamond 234 108 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28602858 28602858 PRJNA879067_P_NODE_21327_length_968_cov_3.043575_g18339_i0 PRJNA879067 21327 968 3.043575 29.461806 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 92 1.93e-16   NR MFQ5847547.1 3159508 g18339 i0 38 0.399793388429752 129 77 40 1 251 637 578 703 MFQ5847547.1 response regulator [Candidatus Methylomirabilales bacterium] diamond 387 92 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium
28634561 28634561 PRJNA879067_P_NODE_94227_length_283_cov_1.433333_g90741_i0 PRJNA879067 94227 283 1.433333 4.05633239 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 137 2.5599999999999996e-35   NR MBY0352886.1 2803731 g90741 i0 91.7 0.763250883392226 72 6 76.3 0 1 216 507 578 MBY0352886.1 WD40 repeat domain-containing protein [Candidatus Babeliales bacterium] diamond 216 137 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
29234298 29234298 PRJNA879067_P_NODE_105369_length_248_cov_0.880000_g101883_i0 PRJNA879067 105369 248 0.88 2.1824 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 67 9e-11   NR MYE89607.1 2026781 g101883 i0 54.5 1.24596774193548 55 15 54.4 1 248 114 62 116 MYE89607.1 DUF5050 domain-containing protein [Candidatus Poribacteria bacterium] diamond 309 67 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29328894 29328894 PRJNA879067_P_NODE_61349_length_440_cov_5.885559_g57864_i0 PRJNA879067 61349 440 5.885559 25.8964596 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 177 1.23e-51   NR HUP54000.1 2072417 g57864 i0 72.5 2.45454545454545 120 33 81.8 0 55 414 1 120 HUP54000.1 molybdopterin-binding protein [Candidatus Methylomirabilota bacterium] diamond 1080 177 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29423454 29423454 PRJNA879067_P_NODE_91209_length_294_cov_1.081448_g87723_i0 PRJNA879067 91209 294 1.081448 3.17945712 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 94.4 5.14e-20   NR MBX9808866.1 2044595 g87723 i0 80 0.561224489795918 55 11 56.1 0 20 184 341 395 MBX9808866.1 DUF11 domain-containing protein [Candidatus Altimarinota bacterium] diamond 165 94.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29865713 29865713 PRJNA879067_P_NODE_52771_length_502_cov_4.289044_g49287_i0 PRJNA879067 52771 502 4.289044 21.53100088 Minisyncoccota bacterium 2053589 Bacteria Bacteria 216 1.1e-66   NR HEY5589326.1 2053589 g49287 i0 75.9 0.794820717131474 133 32 79.5 0 421 23 1 133 HEY5589326.1 glycosyltransferase [Candidatus Paceibacterota bacterium] diamond 399 216 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29897397 29897397 PRJNA879067_P_NODE_110291_length_242_cov_0.911243_g106805_i0 PRJNA879067 110291 242 0.911243 2.20520806 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 60.5 2.12e-8   NR MBM3255883.1 2045217 g106805 i0 48.5 0.84297520661157 68 35 84.3 0 212 9 654 721 MBM3255883.1 hypothetical protein [Candidatus Moraniibacteriota bacterium] diamond 204 60.5 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
29929086 29929086 PRJNA879067_P_NODE_29571_length_772_cov_1.616595_g26274_i0 PRJNA879067 29571 772 1.616595 12.4801134 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 146 7.23e-36   NR HKB24495.1 2072417 g26274 i0 40.8 0.990932642487047 255 123 98.7 8 3 764 978 1205 HKB24495.1 amino acid adenylation domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 765 146 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30118326 30118326 PRJNA879067_P_NODE_106732_length_246_cov_1.682081_g103246_i0 PRJNA879067 106732 246 1.682081 4.13791926 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 91.7 2.28e-19   NR HWC03637.1 2072417 g103246 i0 86.3 3.6219512195122 51 7 62.2 0 3 155 550 600 HWC03637.1 ATP-binding protein [Candidatus Methylomirabilota bacterium] diamond 891 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30434755 30434755 PRJNA879067_P_NODE_70813_length_384_cov_1.289389_g67328_i0 PRJNA879067 70813 384 1.289389 4.95125376 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 71.2 1.88e-11   NR MAU34011.1 2026720 g67328 i0 32.1 0.875 112 64 87.5 2 41 376 548 647 MAU34011.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 336 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30845228 30845228 PRJNA879067_P_NODE_91854_length_291_cov_2.743119_g88368_i0 PRJNA879067 91854 291 2.743119 7.98247629 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 122 3.22e-30   NR MBR3332244.1 2026720 g88368 i0 64.7 0.876288659793814 85 30 87.6 0 28 282 370 454 MBR3332244.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 255 122 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31793425 31793425 PRJNA879067_P_NODE_33617_length_706_cov_4.311216_g30246_i0 PRJNA879067 33617 706 4.311216 30.43718496 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 154 2.799999999999999e-41   NR MBI4974115.1 2282149 g30246 i0 68 0.518413597733711 122 38 51.8 1 388 23 1 121 MBI4974115.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Roizmanbacteria bacterium] diamond 366 154 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
32015110 32015110 PRJNA879067_P_NODE_33918_length_702_cov_2.305246_g30544_i0 PRJNA879067 33918 702 2.305246 16.18282692 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 181 3.11e-49   NR MCX7718590.1 2315423 g30544 i0 60.4 1.21794871794872 144 57 61.5 0 248 679 390 533 MCX7718590.1 c-type cytochrome biogenesis protein CcsB [Candidatus Sumerlaeaceae bacterium] diamond 855 181 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
32141718 32141718 PRJNA879067_P_NODE_16538_length_1149_cov_9.644052_g13806_i0 PRJNA879067 16538 1149 9.644052 110.81015748 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 157 3.19e-41   NR HEY7521937.1 2072417 g13806 i0 44.3 1.5509138381201 201 103 52.5 3 1045 443 12 203 HEY7521937.1 alpha/beta hydrolase [Candidatus Methylomirabilota bacterium] diamond 1782 157 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32236983 32236983 PRJNA879067_P_NODE_32898_length_716_cov_9.636081_g29533_i0 PRJNA879067 32898 716 9.636081 68.99433996 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 137 1.33e-33   NR MSU55270.1 2052153 g29533 i0 32.6 1.93575418994413 221 139 91.3 5 655 2 264 477 MSU55270.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 1386 137 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
32236990 32236990 PRJNA879067_P_NODE_62358_length_434_cov_1.606648_g58873_i0 PRJNA879067 62358 434 1.606648 6.97285232 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 155 2.27e-45   NR HVN87931.1 2838779 g58873 i0 59.7 0.82258064516129 119 48 82.3 0 358 2 1 119 HVN87931.1 hypothetical protein [Candidatus Binatia bacterium] diamond 357 155 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32363390 32363390 PRJNA879067_P_NODE_107719_length_245_cov_0.895349_g104233_i0 PRJNA879067 107719 245 0.895349 2.19360505 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 125 6.179999999999998e-32   NR HSX48993.1 2973664 g104233 i0 81.3 0.979591836734694 80 15 98 0 2 241 145 224 HSX48993.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 240 125 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32584764 32584764 PRJNA879067_P_NODE_111419_length_238_cov_2.290909_g107933_i0 PRJNA879067 111419 238 2.290909 5.45236342 Patescibacteria group bacterium 2052139 Bacteria Bacteria 57.4 2.39e-7   NR HSX37021.1 2052139 g107933 i0 54.1 0.76890756302521 61 26 76.9 1 42 224 358 416 HSX37021.1 hypothetical protein [Patescibacteria group bacterium] diamond 183 57.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;