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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA876641" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA876641 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2128560 2128560 PRJNA876641_P_NODE_2322_length_462_cov_1.532134_g2248_i0 PRJNA876641 2322 462 1.532134 7.07845908 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 219 1.1e-62   NR XP_029215449.1 94643 g2248 i0 80.1 16.6948051948052 136 26 88.3 1 55 462 192 326 XP_029215449.1 uncharacterized protein BESB_028750 [Besnoitia besnoiti] diamond 7713 221 0.990950226244344 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
3404065 3404065 PRJNA876641_P_NODE_4543_length_362_cov_1.961938_g4469_i0 PRJNA876641 4543 362 1.961938 7.10221556 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 126 1.17e-33   NR KAK1936904.1 32595 g4469 i0 68.6 50.8011049723757 86 27 71.3 0 361 104 135 220 KAK1936904.1 putative 40S ribosomal protein S5 [Babesia divergens] diamond 18390 127 0.992125984251969 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia divergens
3790356 3790356 PRJNA876641_P_NODE_16383_length_250_cov_1.305085_g16309_i0 PRJNA876641 16383 250 1.305085 3.2627125 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 122 2.46e-33   NR XP_002367420.1 508771 g16309 i0 74 5.544 77 20 92.4 0 234 4 1 77 XP_002367420.1 translation initiation factor eIF-5A, putative [Toxoplasma gondii ME49] diamond 1386 122 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
5066535 5066535 PRJNA876641_P_NODE_4324_length_369_cov_1.418919_g4250_i0 PRJNA876641 4324 369 1.418919 5.23581111 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 104 3.549999999999999e-23   NR XP_011132110.1 110365 g4250 i0 59.5 1.90243902439024 84 33 67.5 1 369 121 439 522 XP_011132110.1 DEAD-box RNA helicase [Gregarina niphandrodes] diamond 702 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
5956451 5956451 PRJNA876641_P_NODE_19585_length_246_cov_0.890173_g19511_i0 PRJNA876641 19585 246 0.890173 2.18982558 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 129 9.59e-37   NR WBY58514.1 73239 g19511 i0 78.2 11.5609756097561 78 17 95.1 0 13 246 2 79 WBY58514.1 ras-related protein Rab-1B [Plasmodium yoelii yoelii] diamond 2844 129 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
21255304 21255304 PRJNA876641_P_NODE_2477_length_450_cov_6.007958_g2403_i0 PRJNA876641 2477 450 6.007958 27.035811 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 236 1.53e-77   NR XP_013332946.1 5804 g2403 i0 87.9 54.5666666666667 132 16 88 0 447 52 5 136 XP_013332946.1 ribosomal protein S23, putative [Eimeria maxima] diamond 24555 237 0.9957805907173 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
26841996 26841996 PRJNA876641_P_NODE_4541_length_362_cov_2.051903_g4467_i0 PRJNA876641 4541 362 2.051903 7.42788886 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 124 1.13e-32   NR CDI80419.1 51316 g4467 i0 53.3 3.4060773480663 105 49 87 0 319 5 49 153 CDI80419.1 thioredoxin, putative [Eimeria praecox] diamond 1233 124 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
26897198 26897198 PRJNA876641_P_NODE_12661_length_267_cov_1.268041_g12587_i0 PRJNA876641 12661 267 1.268041 3.38566947 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 72 2.27e-12   NR KAF8822793.1 476202 g12587 i0 58.6 1.29213483146067 58 24 65.2 0 93 266 195 252 KAF8822793.1 bystin protein [Cardiosporidium cionae] diamond 345 72 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
27086926 27086926 PRJNA876641_P_NODE_10322_length_280_cov_1.487923_g10248_i0 PRJNA876641 10322 280 1.487923 4.1661844 Babesia bovis 5865 SAR_Eukaryotes SAR_Eukaryotes 61.2 1.77e-8   NR BAN64614.1 5865 g10248 i0 42.6 0.728571428571429 68 38 71.8 1 201 1 31 98 BAN64614.1 cyclin, N-terminal domain containing protein [Babesia bovis] diamond 204 61.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
27624111 27624111 PRJNA876641_P_NODE_15344_length_252_cov_1.720670_g15270_i0 PRJNA876641 15344 252 1.72067 4.3360884 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.81e-6   NR XP_026194385.1 88456 g15270 i0 84 1.19047619047619 25 4 29.8 0 250 176 467 491 XP_026194385.1 dihydrolipoyl dehydrogenase 1, mitochondrial [Cyclospora cayetanensis] diamond 300 55.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
28918251 28918251 PRJNA876641_P_NODE_16148_length_251_cov_0.865169_g16074_i0 PRJNA876641 16148 251 0.865169 2.17157419 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 67.8 6.03e-11   NR CAL7858638.1 1344799 g16074 i0 40.2 4.57768924302789 92 43 95.6 2 5 244 124 215 CAL7858638.1 unnamed protein product [Sarcocystis calchasi] diamond 1149 67.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
28989919 28989919 PRJNA876641_P_NODE_19648_length_246_cov_0.890173_g19574_i0 PRJNA876641 19648 246 0.890173 2.18982558 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 68.9 2.38e-11   NR KAK1442351.1 33632 g19574 i0 48.8 8.07317073170732 82 40 100 1 1 246 676 755 KAK1442351.1 putative phospholipid-transporting ATPase [Babesia gibsoni] diamond 1986 69.3 0.994227994227994 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
29084484 29084484 PRJNA876641_P_NODE_17308_length_249_cov_0.875000_g17234_i0 PRJNA876641 17308 249 0.875 2.17875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0254   NR P84152.1 5850 g17234 i0 42.3 1.92771084337349 52 30 62.7 0 207 52 63 114 P84152.1 RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP [Plasmodium knowlesi] diamond 480 42.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
29486539 29486539 PRJNA876641_P_NODE_19450_length_246_cov_0.890173_g19376_i0 PRJNA876641 19450 246 0.890173 2.18982558 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 58.5 1.05e-7   NR XP_013247443.1 5801 g19376 i0 42.6 0.829268292682927 68 39 82.9 0 205 2 1285 1352 XP_013247443.1 cGMP-inhibited 3',5'-cyclic phosphodiesterase, putative [Eimeria acervulina] diamond 204 58.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30884773 30884773 PRJNA876641_P_NODE_15194_length_253_cov_1.561111_g15120_i0 PRJNA876641 15194 253 1.561111 3.94961083 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 58.9 3.65e-8   NR XP_067924047.1 483139 g15120 i0 37.8 1.70750988142292 74 39 79.4 2 53 253 23 96 XP_067924047.1 ran-specific gtpase-activating [Cystoisospora suis] diamond 432 58.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
32812898 32812898 PRJNA876641_P_NODE_4800_length_356_cov_2.583039_g4726_i0 PRJNA876641 4800 356 2.583039 9.19561884 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 119 1.5199999999999998e-31   NR BAN64285.1 5865 g4726 i0 68 11.3511235955056 75 24 63.2 0 352 128 73 147 BAN64285.1 40S ribosomal protein S15, putative [Babesia bovis] diamond 4041 120 0.991666666666667 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;