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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA876641" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 22 ✖

bioproject 1

  • PRJNA876641 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5956465 5956465 PRJNA876641_P_NODE_20245_length_245_cov_0.895349_g20171_i0 PRJNA876641 20245 245 0.895349 2.19360505 Minisyncoccota bacterium 2053589 Bacteria Bacteria 84 1.17e-16   NR MEE8131662.1 2053589 g20171 i0 51.3 2.87755102040816 76 37 93.1 0 230 3 147 222 MEE8131662.1 copper-translocating P-type ATPase [Candidatus Paceibacterota bacterium] diamond 705 84 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
5956470 5956470 PRJNA876641_P_NODE_20605_length_245_cov_0.895349_g20531_i0 PRJNA876641 20605 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 107 2.54e-25   NR NIM57450.1 2052149 g20531 i0 61.3 17.5591836734694 80 31 98 0 1 240 115 194 NIM57450.1 acetyl-CoA C-acyltransferase [Candidatus Aminicenantes bacterium] diamond 4302 107 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
12332418 12332418 PRJNA876641_P_NODE_7150_length_311_cov_1.617647_g7076_i0 PRJNA876641 7150 311 1.617647 5.03088217 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 161 5.680000000000001e-44   NR NIM89592.1 2052149 g7076 i0 77.7 16.8810289389068 103 23 99.4 0 2 310 156 258 NIM89592.1 molecular chaperone DnaK [Candidatus Aminicenantes bacterium] diamond 5250 161 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
27844783 27844783 PRJNA876641_P_NODE_6244_length_326_cov_0.913043_g6170_i0 PRJNA876641 6244 326 0.913043 2.97652018 Candidatus Goldiibacteriota bacterium 2725315 Bacteria Bacteria 66.2 1.25e-11   NR MCX8092577.1 2725315 g6170 i0 47.1 3.16564417177914 70 34 64.4 1 2 211 23 89 MCX8092577.1 stage V sporulation protein S [Candidatus Goldiibacteriota bacterium] diamond 1032 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Goldiibacteriota         Candidatus Goldiibacteriota bacterium
27876476 27876476 PRJNA876641_P_NODE_8665_length_290_cov_0.944700_g8591_i0 PRJNA876641 8665 290 0.9447 2.73963 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 45.1 0.0102   NR MEY3471024.1 2762014 g8591 i0 37.9 1.3448275862069 66 41 68.3 0 210 13 788 853 MEY3471024.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 390 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27939791 27939791 PRJNA876641_P_NODE_3845_length_385_cov_1.307692_g3771_i0 PRJNA876641 3845 385 1.307692 5.0346142 candidate division KSB3 bacterium 2044937 Bacteria Bacteria 114 1.8e-29   NR PIE31758.1 2044937 g3771 i0 50.8 1.97142857142857 126 56 98.2 2 3 380 33 152 PIE31758.1 MAG: molecular chaperone [candidate division KSB3 bacterium] diamond 759 114 1 Bacteria Bacteria candidate phyla             candidate division KSB3 bacterium
27979281 27979281 PRJNA876641_P_NODE_13585_length_262_cov_1.370370_g13511_i0 PRJNA876641 13585 262 1.37037 3.5903694 Bacteria 2 Bacteria Bacteria 52.4 1.86e-5   NR MBU0661135.1 2052139 g13511 i0 35.3 3.83587786259542 85 50 96.2 2 4 255 45 125 MBU0661135.1 deoxyribodipyrimidine photo-lyase [Patescibacteria group bacterium] diamond 1005 52.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28003026 28003026 PRJNA876641_P_NODE_5025_length_351_cov_1.888489_g4951_i0 PRJNA876641 5025 351 1.888489 6.62859639 candidate division KSB3 bacterium 2044937 Bacteria Bacteria 107 4.59e-27   NR MBD3305601.1 2044937 g4951 i0 49.5 1.79487179487179 105 50 89.7 2 316 2 31 132 MBD3305601.1 Hsp20 family protein [candidate division KSB3 bacterium] diamond 630 107 1 Bacteria Bacteria candidate phyla             candidate division KSB3 bacterium
29044923 29044923 PRJNA876641_P_NODE_5588_length_338_cov_1.407547_g5514_i0 PRJNA876641 5588 338 1.407547 4.75750886 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 91.3 2.02e-19   NR HKN02187.1 2785449 g5514 i0 48.1 0.958579881656805 108 51 95.9 2 1 324 149 251 HKN02187.1 alpha/beta hydrolase [Candidatus Binataceae bacterium] diamond 324 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
29707363 29707363 PRJNA876641_P_NODE_17650_length_249_cov_0.875000_g17576_i0 PRJNA876641 17650 249 0.875 2.17875 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 87.8 4.18e-18   NR NLI75216.1 2053586 g17576 i0 56.3 0.855421686746988 71 31 85.5 0 214 2 186 256 NLI75216.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 213 87.8 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
29802464 29802464 PRJNA876641_P_NODE_14671_length_256_cov_1.409836_g14597_i0 PRJNA876641 14671 256 1.409836 3.60918016 candidate division FCPU426 bacterium 2052330 Bacteria Bacteria 70.5 1.17e-13   NR MBN1594640.1 2052330 g14597 i0 44.4 1.6875 72 37 84.4 1 2 217 20 88 MBN1594640.1 stage V sporulation protein S [candidate division FCPU426 bacterium] diamond 432 70.5 1 Bacteria Bacteria candidate phyla   candidate division FCPU426         candidate division FCPU426 bacterium
30055097 30055097 PRJNA876641_P_NODE_18831_length_247_cov_0.885057_g18757_i0 PRJNA876641 18831 247 0.885057 2.18609079 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 93.6 3.9200000000000006e-21   NR UCC41372.1 2052149 g18757 i0 65.8 0.88663967611336 73 22 88.7 2 221 3 162 231 UCC41372.1 MAG: DUF1295 domain-containing protein [Candidatus Aminicenantes bacterium] diamond 219 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30244977 30244977 PRJNA876641_P_NODE_612_length_778_cov_1.899291_g546_i0 PRJNA876641 612 778 1.899291 14.77648398 Minisyncoccota bacterium 2053589 Bacteria Bacteria 58.9 7.62e-6   NR MEZ0209192.1 2053589 g546 i0 29.7 0.636246786632391 165 107 60.5 4 39 509 528 691 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 495 58.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30316580 30316580 PRJNA876641_P_NODE_4292_length_370_cov_1.518519_g4218_i0 PRJNA876641 4292 370 1.518519 5.6185203 Bacteria 2 Bacteria Bacteria 76.3 2.39e-15   NR HLD03477.1 2099670 g4218 i0 57.6 1.51621621621622 59 25 47.8 0 369 193 31 89 HLD03477.1 RNA-binding protein [Candidatus Dojkabacteria bacterium] diamond 561 76.6 0.996083550913838 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
31477486 31477486 PRJNA876641_P_NODE_13456_length_262_cov_2.962963_g13382_i0 PRJNA876641 13456 262 2.962963 7.76296306 Candidatus Peregrinibacteria bacterium Greene 2030811 Bacteria Bacteria 53.5 6.89e-6   NR TSC57183.1 2017151 g13382 i0 39.4 0.755725190839695 66 40 75.6 0 63 260 290 355 TSC57183.1 MAG: hypothetical protein Greene041662_1034 [Candidatus Peregrinibacteria bacterium Greene0416_62] diamond 198 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota         Candidatus Peregrinibacteria bacterium Greene0416_62
31635411 31635411 PRJNA876641_P_NODE_5656_length_337_cov_0.965909_g5582_i0 PRJNA876641 5656 337 0.965909 3.25511333 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 56.6 1.42e-6   NR MCK6553090.1 2838779 g5582 i0 38.7 0.667655786350148 75 45 65.9 1 324 103 117 191 MCK6553090.1 hypothetical protein [Candidatus Binatia bacterium] diamond 225 56.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32110037 32110037 PRJNA876641_P_NODE_718_length_734_cov_1.877458_g652_i0 PRJNA876641 718 734 1.877458 13.78054172 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 47.4 0.0311   NR MCX6558212.1 2052149 g652 i0 32.8 0.474114441416894 116 69 43.7 3 121 441 224 339 MCX6558212.1 CapA family protein [Candidatus Aminicenantes bacterium] diamond 348 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
32363360 32363360 PRJNA876641_P_NODE_10319_length_280_cov_1.487923_g10245_i0 PRJNA876641 10319 280 1.487923 4.1661844 Patescibacteria group bacterium 2052139 Bacteria Bacteria 84.7 5.04e-17   NR MFA5125061.1 2052139 g10245 i0 51.3 0.814285714285714 76 37 81.4 0 275 48 277 352 MFA5125061.1 hypothetical protein [Patescibacteria group bacterium] diamond 228 84.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32363381 32363381 PRJNA876641_P_NODE_9099_length_287_cov_1.439252_g9025_i0 PRJNA876641 9099 287 1.439252 4.13065324 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 74.3 8.4e-14   NR QHU92367.1 713059 g9025 i0 97 0.344947735191638 33 1 34.5 0 285 187 184 216 QHU92367.1 hypothetical protein GWK76_03580 [Candidatus Saccharibacteria bacterium oral taxon 488] diamond 99 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
32426484 32426484 PRJNA876641_P_NODE_22319_length_242_cov_1.390533_g22245_i0 PRJNA876641 22319 242 1.390533 3.36508986 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 79 4.33e-16   NR MCT4592035.1 2044595 g22245 i0 46.3 1.95867768595041 80 41 99.2 1 2 241 8 85 MCT4592035.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 474 79 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32899260 32899260 PRJNA876641_P_NODE_22820_length_242_cov_0.911243_g22746_i0 PRJNA876641 22820 242 0.911243 2.20520806 Patescibacteria group bacterium 2052139 Bacteria Bacteria 99.8 5.39e-24   NR MBP9762328.1 2052139 g22746 i0 52.5 0.991735537190083 80 37 99.2 1 3 242 38 116 MBP9762328.1 hypothetical protein [Patescibacteria group bacterium] diamond 240 99.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32899267 32899267 PRJNA876641_P_NODE_6940_length_315_cov_0.954545_g6866_i0 PRJNA876641 6940 315 0.954545 3.00681675 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 44.7 0.0157   NR HEY7139281.1 2072417 g6866 i0 35.6 0.857142857142857 90 44 79 5 271 23 182 264 HEY7139281.1 nuclear transport factor 2 family protein [Candidatus Methylomirabilota bacterium] diamond 270 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;