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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA874604" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA874604 · 18 ✖

analysis 1

  • diamond · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
852170 852170 PRJNA874604_P_NODE_57141_length_271_cov_1.409091_g56789_i0 PRJNA874604 57141 271 1.409091 3.81863661 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.4 5.88e-16   NR CDI74584.1 51316 g56789 i0 60 3.77490774907749 65 21 72 2 77 271 162 221 CDI74584.1 thioredoxin, putative [Eimeria praecox] diamond 1023 82.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
4679857 4679857 PRJNA874604_P_NODE_19624_length_406_cov_1.387387_g19272_i0 PRJNA874604 19624 406 1.387387 5.63279122 Cryptosporidium andersoni 117008 SAR_Eukaryotes SAR_Eukaryotes 181 9.89e-54   NR XP_067068911.1 117008 g19272 i0 66.9 17.032019704433502 136 41 98.3 3 3 401 23 157 XP_067068911.1 carrier protein [Cryptosporidium andersoni] diamond 6915 181 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
10166815 10166815 PRJNA874604_P_NODE_7688_length_602_cov_1.062382_g7346_i0 PRJNA874604 7688 602 1.062382 6.39553964 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 264 6.619999999999999e-87   NR XP_013233901.1 5802 g7346 i0 71.9 1.83887043189369 178 50 88.7 0 579 46 1 178 XP_013233901.1 40S ribosomal protein S9, putative [Eimeria tenella] diamond 1107 265 0.99622641509434 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
14880584 14880584 PRJNA874604_P_NODE_78632_length_248_cov_0.880000_g78280_i0 PRJNA874604 78632 248 0.88 2.1824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 6.33e-39   NR XP_029219402.1 94643 g78280 i0 81.3 10.6451612903226 80 15 96.8 0 246 7 38 117 XP_029219402.1 ribosomal protein RPS20 [Besnoitia besnoiti] diamond 2640 135 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
17815758 17815758 PRJNA874604_P_NODE_78594_length_248_cov_0.880000_g78242_i0 PRJNA874604 78594 248 0.88 2.1824 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 142 4.93e-37   NR KAF8822952.1 476202 g78242 i0 79.3 11.8306451612903 82 17 99.2 0 246 1 686 767 KAF8822952.1 aconitate hydratase ACN/IRP [Cardiosporidium cionae] diamond 2934 142 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
23803534 23803534 PRJNA874604_P_NODE_12179_length_496_cov_1.250591_g11828_i0 PRJNA874604 12179 496 1.250591 6.20293136 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 212 1.74e-67   NR XP_002365714.1 508771 g11828 i0 81.5 6.62903225806452 130 24 78.6 0 418 29 22 151 XP_002365714.1 ribosomal protein RPS13 [Toxoplasma gondii ME49] diamond 3288 212 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27157794 27157794 PRJNA874604_P_NODE_45242_length_294_cov_1.787330_g44890_i0 PRJNA874604 45242 294 1.78733 5.2547502 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 116 3.5499999999999995e-31   NR XP_012766397.1 5866 g44890 i0 68.5 6.70408163265306 73 23 74.5 0 3 221 60 132 XP_012766397.1 40S ribosomal protein S15, putative [Babesia bigemina] diamond 1971 117 0.991452991452991 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
28326443 28326443 PRJNA874604_P_NODE_37366_length_317_cov_1.692623_g37014_i0 PRJNA874604 37366 317 1.692623 5.36561491 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 147 1.63e-39   NR XP_665568.1 353151 g37014 i0 68.4 81.3312302839117 95 30 89.9 0 287 3 4 98 XP_665568.1 Pfsec61 [Cryptosporidium hominis TU502] diamond 25782 147 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
28958277 28958277 PRJNA874604_P_NODE_18748_length_413_cov_2.247059_g18396_i0 PRJNA874604 18748 413 2.247059 9.28035367 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 109 2.2e-26   NR XP_013231199.1 5802 g18396 i0 51.9 5.37530266343826 106 51 77 0 95 412 119 224 XP_013231199.1 40S ribosomal protein S3a [Eimeria tenella] diamond 2220 110 0.990909090909091 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
29683944 29683944 PRJNA874604_P_NODE_94690_length_243_cov_0.876471_g94338_i0 PRJNA874604 94690 243 0.876471 2.12982453 root 1 Root_unresolved Root_unresolved 43.9 0.0143   NR XP_001610481.1 484906 g94338 i0 45.7 2.40740740740741 35 19 43.2 0 239 135 146 180 XP_001610481.1 mitogen-activated protein kinase family protein [Babesia bovis T2Bo] diamond 585 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
29802440 29802440 PRJNA874604_P_NODE_38591_length_313_cov_2.045833_g38239_i0 PRJNA874604 38591 313 2.045833 6.40345729 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 146 4.8099999999999996e-42   NR XP_067804708.1 323732 g38239 i0 66.3 10.0063897763578 104 35 99.7 0 313 2 2 105 XP_067804708.1 bifunctional Ribosomal protein S8e/Ribosomal protein S8e [Babesia duncani] diamond 3132 146 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
30466289 30466289 PRJNA874604_P_NODE_87393_length_245_cov_0.895349_g87041_i0 PRJNA874604 87393 245 0.895349 2.19360505 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 53.1 7.82e-6   NR XP_011133061.1 110365 g87041 i0 55.1 0.6 49 22 60 0 6 152 21 69 XP_011133061.1 dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase [Gregarina niphandrodes] diamond 147 53.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
30600292 30600292 PRJNA874604_P_NODE_84453_length_246_cov_0.890173_g84101_i0 PRJNA874604 84453 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 107 5.0399999999999995e-25   NR CAL7865137.1 1344799 g84101 i0 58.5 10.0609756097561 82 34 100 0 246 1 243 324 CAL7865137.1 unnamed protein product [Sarcocystis calchasi] diamond 2475 107 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
30908431 30908431 PRJNA874604_P_NODE_21094_length_395_cov_1.276398_g20742_i0 PRJNA874604 21094 395 1.276398 5.0417721 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 47.8 0.00371   NR XP_029219892.1 94643 g20742 i0 33.3 1.56455696202532 96 47 70.6 5 100 378 988 1069 XP_029219892.1 hypothetical protein BESB_055340 [Besnoitia besnoiti] diamond 618 47.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31264008 31264008 PRJNA874604_P_NODE_77615_length_248_cov_0.880000_g77263_i0 PRJNA874604 77615 248 0.88 2.1824 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 124 9.56e-33   NR EWC85773.1 5843 g77263 i0 67.5 21.9798387096774 83 26 99.2 1 247 2 2 84 EWC85773.1 ADP-ribosylation factor 1 [Plasmodium falciparum NF54] diamond 5451 125 0.992 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
31666996 31666996 PRJNA874604_P_NODE_84097_length_246_cov_0.890173_g83745_i0 PRJNA874604 84097 246 0.890173 2.18982558 Toxoplasma gondii GT1 507601 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.00706   NR EPR60593.1 507601 g83745 i0 36.4 0.939024390243902 77 37 79.3 1 229 35 71 147 EPR60593.1 MORN repeat-containing protein [Toxoplasma gondii GT1] diamond 231 44.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
32078315 32078315 PRJNA874604_P_NODE_47318_length_289_cov_1.425926_g46966_i0 PRJNA874604 47318 289 1.425926 4.12092614 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 54.7 6.21e-7   NR XP_011134038.1 110365 g46966 i0 45.3 2.58477508650519 64 35 66.4 0 83 274 58 121 XP_011134038.1 putative multiprotein bridging factor type 1 [Gregarina niphandrodes] diamond 747 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
32244940 32244940 PRJNA874604_P_NODE_73778_length_250_cov_0.870056_g73426_i0 PRJNA874604 73778 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 101 2.4799999999999994e-23   NR XP_067801460.1 323732 g73426 i0 54.2 13.944 83 38 99.6 0 2 250 159 241 XP_067801460.1 bifunctional eRF1 [Babesia duncani] diamond 3486 102 0.990196078431373 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;