RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA874604" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA874604 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29549734 29549734 PRJNA874604_P_NODE_91650_length_244_cov_0.900585_g91298_i0 PRJNA874604 91650 244 0.900585 2.1974274 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 107 5.52e-25   NR MPZ07268.1 2169593 g91298 i0 62.5 0.983606557377049 80 27 98.4 1 3 242 4 80 MPZ07268.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 240 107 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
30244944 30244944 PRJNA874604_P_NODE_64072_length_259_cov_1.102151_g63720_i0 PRJNA874604 64072 259 1.102151 2.85457109 Pyrodictium abyssi 54256 Archaea Archaea 42.4 0.0175   NR WP_338249940.1 54256 g63720 i0 35.4 0.752895752895753 65 36 75.3 2 234 40 45 103 WP_338249940.1 hypothetical protein [Pyrodictium abyssi] diamond 195 42.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Pyrodictiaceae Pyrodictium Pyrodictium abyssi
30592262 30592262 PRJNA874604_P_NODE_68033_length_252_cov_1.016760_g67681_i0 PRJNA874604 68033 252 1.01676 2.5622352 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 46.2 0.00198   NR HKM78303.1 3045160 g67681 i0 38.6 0.988095238095238 83 45 91.7 1 3 233 11 93 HKM78303.1 lipoyl(octanoyl) transferase LipB [Candidatus Bathyarchaeia archaeon] diamond 249 46.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;