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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA870096" and tax_superkingdom = "Viruses"

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tax_kingdom 3

tax_superkingdom 1

  • Viruses · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27371568 27371568 PRJNA870096_S_NODE_8883_length_621_cov_6.205882_g7376_i0 PRJNA870096 8883 621 6.205882 38.53852722 Moloney murine leukemia virus 11801 Viruses Viruses 394 1.98e-123   NR NP_057933.2 11801 g7376 i0 96.6 3.98067632850242 206 7 99.5 0 620 3 1087 1292 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2472 394 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
27466155 27466155 PRJNA870096_S_NODE_10983_length_556_cov_6.996101_g9399_i0 PRJNA870096 10983 556 6.996101 38.89832156 uncultured virus 340016 Viruses Viruses 107 1.41e-23   NR CAH6421308.1 340016 g9399 i0 43.7 0.642086330935252 119 66 63.7 1 3 356 394 512 CAH6421308.1 PQQ-binding beta-propeller repeat protein [uncultured virus] diamond 357 107 1 Viruses               uncultured virus
27907735 27907735 PRJNA870096_S_NODE_28345_length_337_cov_2.374150_g26681_i0 PRJNA870096 28345 337 2.37415 8.0008855 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 119 4.41e-29   NR YP_009448811.1 2023057 g26681 i0 58 2.32344213649852 100 40 89 1 337 38 355 452 YP_009448811.1 Serine-tRNA synthetase, type1 [Orpheovirus IHUMI-LCC2] diamond 783 119 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
28097420 28097420 PRJNA870096_S_NODE_136565_length_153_cov_1.154545_g134901_i0 PRJNA870096 136565 153 1.154545 1.76645385 Retroviridae sp. 2681591 Viruses Viruses 73.2 2.06e-13   NR UGO47158.1 2681591 g134901 i0 56.5 3.66666666666667 46 20 90.2 0 141 4 287 332 UGO47158.1 MAG: envelope protein [Retroviridae sp.] diamond 561 73.2 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae   Retroviridae sp.
28255241 28255241 PRJNA870096_S_NODE_59606_length_227_cov_2.000000_g57942_i0 PRJNA870096 59606 227 2 4.54 Tupanvirus soda lake 2126985 Viruses Viruses 68.6 1.97e-11   NR YP_010782487.1 2126985 g57942 i0 53.2 1.73127753303965 62 28 81.9 1 227 42 277 337 YP_010782487.1 phosphoribosyl transferase domain protein [Tupanvirus soda lake] diamond 393 68.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
28926431 28926431 PRJNA870096_S_NODE_91748_length_184_cov_1.021277_g90084_i0 PRJNA870096 91748 184 1.021277 1.87914968 Zebrafish jaw picornavirus RQ13 Viruses Viruses 43.5 0.00391   NR NP_859022.1 RQ13 g90084 i0 36.4 3.45652173913043 55 34 89.7 1 183 19 51 104 NP_859022.1 2A [Kobuvirus bejaponia] diamond 636 43.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
29139688 29139688 PRJNA870096_S_NODE_42909_length_270_cov_2.850220_g41245_i0 PRJNA870096 42909 270 2.85022 7.695594 uncultured virus 340016 Viruses Viruses 52.4 2.02e-5   NR CAK7994547.1 340016 g41245 i0 52.6 0.633333333333333 57 24 60 2 26 187 439 495 CAK7994547.1 Hypothetical protein POVR1_LOCUS71 [uncultured virus] diamond 171 52.4 1 Viruses               uncultured virus
29360484 29360484 PRJNA870096_S_NODE_137529_length_153_cov_0.872727_g135865_i0 PRJNA870096 137529 153 0.872727 1.33527231 Zebrafish jaw picornavirus RQ13 Viruses Viruses 61.2 3.33e-9   NR WAB24476.1 RQ13 g135865 i0 60 0.980392156862745 50 20 98 0 1 150 2561 2610 WAB24476.1 polyprotein [Avian megrivirus] diamond 150 61.2 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Megrivirus Zebrafish jaw picornavirus
29739044 29739044 PRJNA870096_S_NODE_136970_length_153_cov_0.872727_g135306_i0 PRJNA870096 136970 153 0.872727 1.33527231 Spring viraemia of carp virus 696863 Viruses Viruses 70.9 2.62e-13   NR QHX41416.1 696863 g135306 i0 60 3.92156862745098 50 20 98 0 3 152 104 153 QHX41416.1 glycoprotein, partial [Sprivivirus cyprinus] diamond 600 70.9 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
29936976 29936976 PRJNA870096_S_NODE_35491_length_299_cov_3.023438_g33827_i0 PRJNA870096 35491 299 3.023438 9.04007962 Zebrafish jaw picornavirus RQ13 Viruses Viruses 74.3 6.01e-13   NR QJX58422.1 RQ13 g33827 i0 44.3 4.69565217391304 97 52 95.3 2 299 15 2256 2352 QJX58422.1 polyprotein [Salivirus A] diamond 1404 74.7 0.994645247657296 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Salivirus Zebrafish jaw picornavirus
29992072 29992072 PRJNA870096_S_NODE_94631_length_181_cov_1.601449_g92967_i0 PRJNA870096 94631 181 1.601449 2.89862269 uncultured virus 340016 Viruses Viruses 47.4 3.67e-4   NR CAK7994547.1 340016 g92967 i0 40 0.994475138121547 60 35 97.8 1 3 179 431 490 CAK7994547.1 Hypothetical protein POVR1_LOCUS71 [uncultured virus] diamond 180 47.4 1 Viruses               uncultured virus
30781870 30781870 PRJNA870096_S_NODE_32194_length_315_cov_3.375000_g30530_i0 PRJNA870096 32194 315 3.375 10.63125 Riboviria sp. 2585031 Viruses Viruses 72.4 3.22e-12   NR WKV34572.1 2585031 g30530 i0 60.7 0.533333333333333 56 22 53.3 0 292 125 497 552 WKV34572.1 MAG: RNA-dependent RNA polymerase, partial [Riboviria sp.] diamond 168 72.4 1 Viruses               Riboviria sp.
30813451 30813451 PRJNA870096_S_NODE_50834_length_247_cov_1.504902_g49170_i0 PRJNA870096 50834 247 1.504902 3.71710794 Pithovirus LCPAC2 2506591 Viruses Viruses 74.3 1.32e-13   NR QBK91025.1 2506591 g49170 i0 70.2 0.57085020242915 47 14 57.1 0 102 242 217 263 QBK91025.1 MAG: uncharacterized protein LCPAC201_03260 [Pithovirus LCPAC201] diamond 141 74.3 1 Viruses Pithoviruses             Pithovirus LCPAC201
30876661 30876661 PRJNA870096_S_NODE_108974_length_170_cov_1.133858_g107310_i0 PRJNA870096 108974 170 1.133858 1.9275586 Rocky Mountain birnavirus 3077841 Viruses Viruses 99.4 1.6000000000000002e-22   NR WNN64190.1 3077841 g107310 i0 92.9 0.988235294117647 56 4 98.8 0 168 1 761 816 WNN64190.1 VP1 [Rocky Mountain birnavirus] diamond 168 99.4 1 Viruses   Orthornavirae       Birnaviridae   Rocky Mountain birnavirus
31224045 31224045 PRJNA870096_S_NODE_26115_length_352_cov_6.935275_g24451_i0 PRJNA870096 26115 352 6.935275 24.412168 uncultured virus 340016 Viruses Viruses 63.2 9.21e-9   NR CAK7995066.1 340016 g24451 i0 77.3 0.758522727272727 44 10 37.5 0 350 219 1455 1498 CAK7995066.1 Hypothetical protein POVR1_LOCUS584 [uncultured virus] diamond 267 63.2 1 Viruses               uncultured virus
31414069 31414069 PRJNA870096_S_NODE_64036_length_219_cov_1.363636_g62372_i0 PRJNA870096 64036 219 1.363636 2.98636284 Zebrafish jaw picornavirus RQ13 Viruses Viruses 52 1.56e-5   NR QMI57975.1 RQ13 g62372 i0 52.3 2.83561643835616 44 21 60.3 0 85 216 1029 1072 QMI57975.1 polyprotein, partial [Pacific black duck sicinivirus-like virus] diamond 621 52 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Sicinivirus Zebrafish jaw picornavirus
31825037 31825037 PRJNA870096_S_NODE_6797_length_717_cov_4.065282_g5446_i0 PRJNA870096 6797 717 4.065282 29.14807194 Gammaretrovirus murleu 3428959 Viruses Viruses 476 1.2799999999999998e-165   NR 8WUS_E 11801 g5446 i0 99.1 2.91213389121339 232 2 97.1 0 697 2 138 369 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 2088 476 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31951696 31951696 PRJNA870096_S_NODE_126097_length_159_cov_1.017241_g124433_i0 PRJNA870096 126097 159 1.017241 1.61741319 Spring viraemia of carp virus 696863 Viruses Viruses 52.8 2.51e-6   NR AMR72046.1 696863 g124433 i0 49 3.84905660377358 51 26 96.2 0 3 155 126 176 AMR72046.1 glycoprotein, partial [Sprivivirus cyprinus] diamond 612 52.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
31951697 31951697 PRJNA870096_S_NODE_12777_length_514_cov_10.719745_g11154_i0 PRJNA870096 12777 514 10.719745 55.0994893 uncultured virus 340016 Viruses Viruses 113 1.03e-25   NR CAH6421308.1 340016 g11154 i0 46.2 0.694552529182879 119 63 68.9 1 3 356 394 512 CAH6421308.1 PQQ-binding beta-propeller repeat protein [uncultured virus] diamond 357 113 1 Viruses               uncultured virus
32300181 32300181 PRJNA870096_S_NODE_55079_length_237_cov_0.953608_g53415_i0 PRJNA870096 55079 237 0.953608 2.26005096 Zebrafish jaw picornavirus RQ13 Viruses Viruses 104 2.33e-24   NR ADI48258.1 RQ13 g53415 i0 57.1 0.974683544303797 77 32 97.5 1 2 232 121 196 ADI48258.1 3D, partial [Bat kobuvirus TM003k] diamond 231 104 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
32331816 32331816 PRJNA870096_S_NODE_108579_length_170_cov_1.511811_g106915_i0 PRJNA870096 108579 170 1.511811 2.5700787 uncultured virus 340016 Viruses Viruses 52.4 5.48e-6   NR CAK7994547.1 340016 g106915 i0 47.4 1.00588235294118 57 25 91.8 1 1 156 444 500 CAK7994547.1 Hypothetical protein POVR1_LOCUS71 [uncultured virus] diamond 171 52.4 1 Viruses               uncultured virus
32394822 32394822 PRJNA870096_S_NODE_115399_length_165_cov_2.459016_g113735_i0 PRJNA870096 115399 165 2.459016 4.0573764 Spring viraemia of carp virus 696863 Viruses Viruses 72.4 4.3e-13   NR NP_116744.1 696863 g113735 i0 64.8 0.981818181818182 54 19 98.2 0 4 165 335 388 NP_116744.1 nucleocapsid protein [Sprivivirus cyprinus] diamond 162 72.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
32647099 32647099 PRJNA870096_S_NODE_63520_length_220_cov_1.237288_g61856_i0 PRJNA870096 63520 220 1.237288 2.7220336 Spring viraemia of carp virus 696863 Viruses Viruses 94.7 1.41e-20   NR NP_116748.1 696863 g61856 i0 64.4 0.995454545454545 73 26 99.5 0 1 219 1802 1874 NP_116748.1 polymerase [Sprivivirus cyprinus] diamond 219 94.7 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Sprivivirus Spring viraemia of carp virus
32710354 32710354 PRJNA870096_S_NODE_23120_length_375_cov_4.475904_g21458_i0 PRJNA870096 23120 375 4.475904 16.78464 Fadolivirus algeromassiliense 3060017 Viruses Viruses 142 8.29e-40   NR YP_010802923.1 3060017 g21458 i0 58.9 0.992 124 51 99.2 0 2 373 102 225 YP_010802923.1 O-methyltransferase [Fadolivirus algeromassiliense] diamond 372 142 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;