RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA870096" and tax_kingdom = "Nanobdellati"

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tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 2 ✖

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29707312 29707312 PRJNA870096_S_NODE_50070_length_249_cov_1.398058_g48406_i0 PRJNA870096 50070 249 1.398058 3.48116442 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 140 2.84e-39   NR MFH1447465.1 2250274 g48406 i0 79.7 15.433734939759 79 16 95.2 0 9 245 150 228 MFH1447465.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [Candidatus Micrarchaeota archaeon] diamond 3843 140 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
32553240 32553240 PRJNA870096_S_NODE_53419_length_240_cov_3.502538_g51755_i0 PRJNA870096 53419 240 3.502538 8.4060912 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 79 4.16e-15   NR UCD07325.1 3121606 g51755 i0 52.9 1.7 68 32 85 0 240 37 287 354 UCD07325.1 MAG: polyprenyl synthetase family protein [Candidatus Aenigmatarchaeota archaeon] diamond 408 79 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;