RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA870096" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA870096 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27907735 27907735 PRJNA870096_S_NODE_28345_length_337_cov_2.374150_g26681_i0 PRJNA870096 28345 337 2.37415 8.0008855 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 119 4.41e-29   NR YP_009448811.1 2023057 g26681 i0 58 2.32344213649852 100 40 89 1 337 38 355 452 YP_009448811.1 Serine-tRNA synthetase, type1 [Orpheovirus IHUMI-LCC2] diamond 783 119 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
28255241 28255241 PRJNA870096_S_NODE_59606_length_227_cov_2.000000_g57942_i0 PRJNA870096 59606 227 2 4.54 Tupanvirus soda lake 2126985 Viruses Viruses 68.6 1.97e-11   NR YP_010782487.1 2126985 g57942 i0 53.2 1.73127753303965 62 28 81.9 1 227 42 277 337 YP_010782487.1 phosphoribosyl transferase domain protein [Tupanvirus soda lake] diamond 393 68.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Tupanvirus Tupanvirus salinum
32710354 32710354 PRJNA870096_S_NODE_23120_length_375_cov_4.475904_g21458_i0 PRJNA870096 23120 375 4.475904 16.78464 Fadolivirus algeromassiliense 3060017 Viruses Viruses 142 8.29e-40   NR YP_010802923.1 3060017 g21458 i0 58.9 0.992 124 51 99.2 0 2 373 102 225 YP_010802923.1 O-methyltransferase [Fadolivirus algeromassiliense] diamond 372 142 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;