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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA867519" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA867519 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27876347 27876347 PRJNA867519_P_NODE_18305_length_283_cov_1.466667_g18151_i0 PRJNA867519 18305 283 1.466667 4.15066761 Nitrososphaerota archaeon 2026795 Archaea Archaea 59.3 9.34e-8   NR MDG6921989.1 2026795 g18151 i0 35.2 0.964664310954064 91 56 94.3 2 8 274 697 786 MDG6921989.1 hypothetical protein [Nitrososphaerota archaeon] diamond 273 59.3 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28034425 28034425 PRJNA867519_P_NODE_23405_length_260_cov_2.042781_g23251_i0 PRJNA867519 23405 260 2.042781 5.3112306 Nitrosotalea devaniterrae 1078905 Archaea Archaea 58.5 1.22e-7   NR 6VCF_A 1078905 g23251 i0 35.9 0.9 78 48 88.8 2 250 20 317 393 6VCF_A Chain A, carotenoid cleavage dioxygenase [Nitrosotalea devaniterrae] diamond 234 58.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
28855034 28855034 PRJNA867519_P_NODE_21428_length_269_cov_1.571429_g21274_i0 PRJNA867519 21428 269 1.571429 4.22714401 Nitrososphaerota archaeon 2026795 Archaea Archaea 79 9.57e-15   NR MDG6921989.1 2026795 g21274 i0 51.9 0.8810408921933092 79 38 88.1 0 250 14 1080 1158 MDG6921989.1 hypothetical protein [Nitrososphaerota archaeon] diamond 237 79 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
29021559 29021559 PRJNA867519_P_NODE_6488_length_429_cov_1.705056_g6334_i0 PRJNA867519 6488 429 1.705056 7.31469024 Archaea 2157 Archaea Archaea 138 3.07e-36   NR MEM3449643.1 2026795 g6334 i0 46.1 9.86013986013986 141 74 98.6 1 427 5 39 177 MEM3449643.1 aminotransferase class V-fold PLP-dependent enzyme [Nitrososphaerota archaeon] diamond 4230 139 0.992805755395683 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31255803 31255803 PRJNA867519_P_NODE_16335_length_293_cov_1.109091_g16181_i0 PRJNA867519 16335 293 1.109091 3.24963663 Nitrososphaerota archaeon 2026795 Archaea Archaea 43.9 0.024   NR MBI2126805.1 2026795 g16181 i0 35.1 1.21843003412969 57 33 54.3 1 284 126 166 222 MBI2126805.1 CBS domain-containing protein [Nitrososphaerota archaeon] diamond 357 43.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;