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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA864829" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA864829 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11051024 11051024 PRJNA864829_S_NODE_4069_length_285_cov_1.190678_g3983_i0 PRJNA864829 4069 285 1.190678 3.3934323 Brachiaria hybrid cultivar 680201 Plants Plants 107 1.01e-25   NR ACX43954.1 680201 g3983 i0 68.7 1.41052631578947 67 21 70.5 0 2 202 270 336 ACX43954.1 cysteine protease 1 [Brachiaria hybrid cultivar] diamond 402 107 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Brachiaria Brachiaria hybrid cultivar
16149976 16149976 PRJNA864829_S_NODE_4413_length_277_cov_1.307018_g4327_i0 PRJNA864829 4413 277 1.307018 3.62043986 Eukaryota 2759 Plants Plants 87 1.24e-19   NR BAH57033.1 3702 g4327 i0 60.3 19.7870036101083 78 30 84.5 1 12 245 40 116 BAH57033.1 AT4G34670 [Arabidopsis thaliana] diamond 5481 87.4 0.995423340961098 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
17814329 17814329 PRJNA864829_S_NODE_3434_length_302_cov_2.233202_g3348_i0 PRJNA864829 3434 302 2.233202 6.74427004 Platanthera zijinensis 2320716 Plants Plants 77.8 1.74e-14   NR KAK8952547.1 2320716 g3348 i0 60.9 19.1920529801325 69 22 68.5 1 301 95 218 281 KAK8952547.1 40S ribosomal protein S6-1 [Platanthera zijinensis] diamond 5796 77.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Platanthera Platanthera zijinensis
18698627 18698627 PRJNA864829_S_NODE_4175_length_282_cov_2.373391_g4089_i0 PRJNA864829 4175 282 2.373391 6.69296262 Eukaryota 2759 Plants Plants 82 4.57e-16   NR KAL3738797.1 34317 g4089 i0 47.6 13.7659574468085 84 41 88.3 3 1 249 128 209 KAL3738797.1 hypothetical protein ACJRO7_020208 [Eucalyptus globulus] diamond 3882 82.4 0.995145631067961 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Myrtaceae Eucalyptus Eucalyptus globulus
26683284 26683284 PRJNA864829_S_NODE_14781_length_169_cov_0.875000_g14695_i0 PRJNA864829 14781 169 0.875 1.47875 root 1 Root_unresolved Root_unresolved 45.8 7.36e-4   NR ABH09321.1 3818 g14695 i0 55.6 1.38461538461538 45 19 79.9 1 148 14 86 129 ABH09321.1 leucine rich protein [Arachis hypogaea] diamond 234 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea
27126044 27126044 PRJNA864829_S_NODE_8282_length_216_cov_0.964072_g8196_i0 PRJNA864829 8282 216 0.964072 2.08239552 Cannabaceae 3481 Plants Plants 65.5 2.95e-12   NR XP_030506791.1 3483 g8196 i0 77.1 2.01388888888889 48 11 66.7 0 209 66 12 59 XP_030506791.1 arabinogalactan protein 13-like [Cannabis sativa] diamond 435 65.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
29076368 29076368 PRJNA864829_S_NODE_6868_length_234_cov_1.162162_g6782_i0 PRJNA864829 6868 234 1.162162 2.71945908 Olea europaea subsp. europaea 158383 Plants Plants 50.4 5.91e-5   NR CAA2946943.1 158383 g6782 i0 63.9 0.858974358974359 36 9 41 1 198 103 123 158 CAA2946943.1 Hypothetical predicted protein [Olea europaea subsp. europaea] diamond 201 50.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
29683916 29683916 PRJNA864829_S_NODE_6970_length_232_cov_2.234973_g6884_i0 PRJNA864829 6970 232 2.234973 5.18513736 Eukaryota 2759 Plants Plants 99 6.6499999999999995e-25   NR KAG0612348.1 3225 g6884 i0 63.2 9.60775862068965 76 28 98.3 0 231 4 17 92 KAG0612348.1 hypothetical protein M758_6G020300 [Ceratodon purpureus] diamond 2229 100 0.99 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
31160593 31160593 PRJNA864829_S_NODE_13115_length_177_cov_1.804688_g13029_i0 PRJNA864829 13115 177 1.804688 3.19429776 Ambrosia artemisiifolia 4212 Plants Plants 72.8 4.09e-15   NR KAI7737566.1 4212 g13029 i0 97.5 0.677966101694915 40 1 67.8 0 175 56 44 83 KAI7737566.1 hypothetical protein M8C21_019527 [Ambrosia artemisiifolia] diamond 120 72.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Ambrosia Ambrosia artemisiifolia
32308183 32308183 PRJNA864829_S_NODE_10399_length_196_cov_1.897959_g10313_i0 PRJNA864829 10399 196 1.897959 3.71999964 Streptophyta 35493 Plants Plants 47.8 1.93e-4   NR XP_024364000.1 3218 g10313 i0 50 4.51530612244898 62 23 82.7 4 3 164 76 137 XP_024364000.1 40S ribosomal protein S10-1-like [Physcomitrium patens] diamond 885 48.1 0.993762993762994 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
32804749 32804749 PRJNA864829_S_NODE_9060_length_208_cov_1.188679_g8974_i0 PRJNA864829 9060 208 1.188679 2.47245232 Lotus japonicus 34305 Plants Plants 70.5 3.04e-13   NR AFK45263.1 34305 g8974 i0 53.6 2.97115384615385 69 32 99.5 0 208 2 36 104 AFK45263.1 unknown [Lotus japonicus] diamond 618 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;