RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA864829" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA864829 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8889847 8889847 PRJNA864829_S_NODE_5087_length_262_cov_2.816901_g5001_i0 PRJNA864829 5087 262 2.816901 7.38028062 Metazoa 33208 Cnidaria other_Eukaryota 94 7.6300000000000005e-22   NR XP_012553648.1 6087 g5001 i0 70.6 7.93511450381679 68 19 76.7 1 260 60 114 181 XP_012553648.1 large ribosomal subunit protein uL22 isoform X1 [Hydra vulgaris] diamond 2079 94 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
27063226 27063226 PRJNA864829_S_NODE_5662_length_252_cov_1.458128_g5576_i0 PRJNA864829 5662 252 1.458128 3.67448256 Anthozoa 6101 Cnidaria other_Eukaryota 65.9 2.85e-10   NR XP_048583816.1 45351 g5576 i0 44.3 15.1904761904762 79 40 94 2 16 252 260 334 XP_048583816.1 tyrosine-protein kinase CSK isoform X2 [Nematostella vectensis] diamond 3828 65.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;