contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA864829" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20363237 | 20363237 | PRJNA864829_S_NODE_4356_length_278_cov_2.502183_g4270_i0 | PRJNA864829 | 4356 | 278 | 2.502183 | 6.95606874 | Faecalicatena contorta | 39482 | Bacteria | Bacteria | 62 | 8.48e-11 | NR | PWJ48915.1 | 39482 | g4270 | i0 | 93.3 | 0.323741007194245 | 30 | 2 | 32.4 | 0 | 184 | 273 | 1 | 30 | PWJ48915.1 hypothetical protein A8805_10956 [Faecalicatena contorta] | diamond | 90 | 62 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Faecalicatena | Faecalicatena contorta | ||
| 26991629 | 26991629 | PRJNA864829_S_NODE_6042_length_246_cov_1.624365_g5956_i0 | PRJNA864829 | 6042 | 246 | 1.624365 | 3.9959379 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 127 | 6.249999999999998e-32 | NR | MDD3341693.1 | 1903720 | g5956 | i0 | 77.8 | 0.878048780487805 | 72 | 16 | 87.8 | 0 | 242 | 27 | 679 | 750 | MDD3341693.1 phosphoketolase family protein [Bacilli bacterium] | diamond | 216 | 127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 27371482 | 27371482 | PRJNA864829_S_NODE_9803_length_201_cov_1.098684_g9717_i0 | PRJNA864829 | 9803 | 201 | 1.098684 | 2.20835484 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 95.1 | 7.530000000000001e-21 | NR | MEI3499095.1 | 1903720 | g9717 | i0 | 83.7 | 1.49253731343284 | 49 | 8 | 73.1 | 0 | 199 | 53 | 199 | 247 | MEI3499095.1 LTA synthase family protein [Bacilli bacterium] | diamond | 300 | 95.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 27971069 | 27971069 | PRJNA864829_S_NODE_4405_length_277_cov_2.070175_g4319_i0 | PRJNA864829 | 4405 | 277 | 2.070175 | 5.73438475 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 45.1 | 0.0078 | NR | MBP3411900.1 | 2485925 | g4319 | i0 | 40 | 0.595667870036101 | 55 | 31 | 57.4 | 1 | 257 | 99 | 183 | 237 | MBP3411900.1 tRNA dihydrouridine synthase DusB [Oscillospiraceae bacterium] | diamond | 165 | 45.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 28791845 | 28791845 | PRJNA864829_S_NODE_10387_length_196_cov_2.210884_g10301_i0 | PRJNA864829 | 10387 | 196 | 2.210884 | 4.33333264 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 55.1 | 8.4e-7 | NR | MBO5910446.1 | 2044939 | g10301 | i0 | 45.5 | 0.841836734693878 | 55 | 30 | 84.2 | 0 | 12 | 176 | 283 | 337 | MBO5910446.1 sel1 repeat family protein [Clostridia bacterium] | diamond | 165 | 55.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28791846 | 28791846 | PRJNA864829_S_NODE_13487_length_175_cov_1.269841_g13401_i0 | PRJNA864829 | 13487 | 175 | 1.269841 | 2.22222175 | Tissierellia bacterium KA | 2049431 | Bacteria | Bacteria | 104 | 1.7e-26 | NR | KXB45279.1 | 1588751 | g13401 | i0 | 100 | 0.994285714285714 | 58 | 0 | 99.4 | 0 | 174 | 1 | 76 | 133 | KXB45279.1 ATP synthase, subunit E [Tissierellia bacterium KA00581] | diamond | 174 | 104 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellia bacterium KA00581 | |||||
| 28886649 | 28886649 | PRJNA864829_S_NODE_9408_length_204_cov_2.800000_g9322_i0 | PRJNA864829 | 9408 | 204 | 2.8 | 5.712 | Clostridium amylolyticum | 1121298 | Bacteria | Bacteria | 132 | 1.8e-37 | NR | WP_073009000.1 | 1121298 | g9322 | i0 | 97 | 0.985294117647059 | 67 | 2 | 98.5 | 0 | 203 | 3 | 22 | 88 | WP_073009000.1 NYN domain-containing protein [Clostridium amylolyticum] | diamond | 201 | 132 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium amylolyticum | ||
| 29076365 | 29076365 | PRJNA864829_S_NODE_13648_length_174_cov_1.184000_g13562_i0 | PRJNA864829 | 13648 | 174 | 1.184 | 2.06016 | Selenomonas sp. oral taxon 149 str. 67H29BP | 864563 | Bacteria | Bacteria | 39.7 | 0.0237 | NR | EFM24372.1 | 864563 | g13562 | i0 | 52.6 | 0.655172413793103 | 38 | 18 | 65.5 | 0 | 24 | 137 | 10 | 47 | EFM24372.1 hypothetical protein HMPREF9166_0012 [Selenomonas sp. oral taxon 149 str. 67H29BP] | diamond | 114 | 39.7 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Selenomonadaceae | Selenomonas | Selenomonas sp. oral taxon 149 | ||
| 29234150 | 29234150 | PRJNA864829_S_NODE_4449_length_276_cov_1.898678_g4363_i0 | PRJNA864829 | 4449 | 276 | 1.898678 | 5.24035128 | Clostridium amylolyticum | 1121298 | Bacteria | Bacteria | 176 | 4.46e-51 | NR | WP_242949014.1 | 1121298 | g4363 | i0 | 98.9 | 0.989130434782609 | 91 | 1 | 98.9 | 0 | 3 | 275 | 83 | 173 | WP_242949014.1 flavocytochrome c [Clostridium amylolyticum] | diamond | 273 | 176 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium amylolyticum | ||
| 30308374 | 30308374 | PRJNA864829_S_NODE_10052_length_199_cov_1.440000_g9966_i0 | PRJNA864829 | 10052 | 199 | 1.44 | 2.8656 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 48.9 | 1.41e-4 | NR | HOI47073.1 | 1903720 | g9966 | i0 | 26.3 | 1.82412060301508 | 57 | 42 | 85.9 | 0 | 29 | 199 | 311 | 367 | HOI47073.1 ABC transporter permease subunit [Bacilli bacterium] | diamond | 363 | 48.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 30592160 | 30592160 | PRJNA864829_S_NODE_4493_length_275_cov_2.353982_g4407_i0 | PRJNA864829 | 4493 | 275 | 2.353982 | 6.4734505 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 129 | 3.27e-33 | NR | WP_272453523.1 | 1502 | g4407 | i0 | 69.7 | 0.970909090909091 | 89 | 27 | 97.1 | 0 | 2 | 268 | 78 | 166 | WP_272453523.1 DUF4433 domain-containing protein [Clostridium perfringens] | diamond | 267 | 129 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 31003057 | 31003057 | PRJNA864829_S_NODE_10154_length_198_cov_2.107383_g10068_i0 | PRJNA864829 | 10154 | 198 | 2.107383 | 4.17261834 | Erysipelothrix sp. | 38403 | Bacteria | Bacteria | 47.8 | 3.44e-4 | NR | NLA78563.1 | 38403 | g10068 | i0 | 50 | 0.575757575757576 | 38 | 19 | 57.6 | 0 | 115 | 2 | 17 | 54 | NLA78563.1 F0F1 ATP synthase subunit alpha [Erysipelothrix sp.] | diamond | 114 | 47.8 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelothrix | Erysipelothrix sp. | ||
| 32236825 | 32236825 | PRJNA864829_S_NODE_10198_length_198_cov_1.073826_g10112_i0 | PRJNA864829 | 10198 | 198 | 1.073826 | 2.12617548 | [Clostridium] innocuum | 1522 | Bacteria | Bacteria | 43.5 | 0.011 | NR | WP_233106945.1 | 1522 | g10112 | i0 | 38.2 | 0.833333333333333 | 55 | 30 | 83.3 | 1 | 28 | 192 | 59 | 109 | WP_233106945.1 isoaspartyl peptidase/L-asparaginase [[Clostridium] innocuum] | diamond | 165 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | [Clostridium] innocuum | ||
| 32655142 | 32655142 | PRJNA864829_S_NODE_2280_length_349_cov_1.770000_g2194_i0 | PRJNA864829 | 2280 | 349 | 1.77 | 6.1773 | Bacillota | 1239 | Bacteria | Bacteria | 138 | 1.84e-35 | NR | WP_291579049.1 | 1946370 | g2194 | i0 | 55.2 | 2.96561604584527 | 116 | 52 | 99.7 | 0 | 349 | 2 | 172 | 287 | WP_291579049.1 peptidase domain-containing ABC transporter, partial [Clostridium sp. UBA6640] | diamond | 1035 | 138 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. UBA6640 | ||
| 32718525 | 32718525 | PRJNA864829_S_NODE_5780_length_250_cov_1.597015_g5694_i0 | PRJNA864829 | 5780 | 250 | 1.597015 | 3.9925375 | Anaerocolumna | 1843210 | Bacteria | Bacteria | 142 | 5.6399999999999996e-40 | NR | WP_073587253.1 | 100134 | g5694 | i0 | 79.5 | 1.992 | 83 | 17 | 99.6 | 0 | 2 | 250 | 137 | 219 | WP_073587253.1 endonuclease/exonuclease/phosphatase family protein [Anaerocolumna xylanovorans] | diamond | 498 | 142 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Anaerocolumna | Anaerocolumna xylanovorans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;