contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA864829" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13600992 | 13600992 | PRJNA864829_S_NODE_5531_length_254_cov_1.404878_g5445_i0 | PRJNA864829 | 5531 | 254 | 1.404878 | 3.56839012 | Mycobacterium szulgai | 1787 | Bacteria | Bacteria | 151 | 3.31e-43 | NR | WP_085672270.1 | 1787 | g5445 | i0 | 100 | 0.838582677165354 | 71 | 0 | 83.9 | 0 | 2 | 214 | 227 | 297 | WP_085672270.1 aldose 1-epimerase [Mycobacterium szulgai] | diamond | 213 | 151 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium szulgai | ||
| 27971067 | 27971067 | PRJNA864829_S_NODE_12185_length_183_cov_2.014925_g12099_i0 | PRJNA864829 | 12185 | 183 | 2.014925 | 3.68731275 | Candidatus Frankia alpina | 2699483 | Bacteria | Bacteria | 42 | 0.0311 | NR | WP_235825961.1 | 2699483 | g12099 | i0 | 64.5 | 0.508196721311475 | 31 | 7 | 47.5 | 2 | 52 | 138 | 6 | 34 | WP_235825961.1 Gfo/Idh/MocA family oxidoreductase [Candidatus Frankia alpina] | diamond | 93 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Frankiales | Frankiaceae | Frankia | Candidatus Frankia alpina | ||
| 28065811 | 28065811 | PRJNA864829_S_NODE_12365_length_182_cov_1.563910_g12279_i0 | PRJNA864829 | 12365 | 182 | 1.56391 | 2.8463162 | Mycobacterium szulgai | 1787 | Bacteria | Bacteria | 125 | 4.569999999999999e-32 | NR | WP_085669014.1 | 1787 | g12279 | i0 | 100 | 0.989010989010989 | 60 | 0 | 98.9 | 0 | 180 | 1 | 251 | 310 | WP_085669014.1 phytoene desaturase family protein [Mycobacterium szulgai] | diamond | 180 | 125 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium szulgai | ||
| 28097354 | 28097354 | PRJNA864829_S_NODE_4005_length_286_cov_2.109705_g3919_i0 | PRJNA864829 | 4005 | 286 | 2.109705 | 6.0337563 | Mycobacterium szulgai | 1787 | Bacteria | Bacteria | 193 | 3.8399999999999995e-57 | NR | WP_085670626.1 | 1787 | g3919 | i0 | 100 | 0.996503496503496 | 95 | 0 | 99.7 | 0 | 285 | 1 | 10 | 104 | WP_085670626.1 TfuA-like protein [Mycobacterium szulgai] | diamond | 285 | 193 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium szulgai | ||
| 28097356 | 28097356 | PRJNA864829_S_NODE_6865_length_234_cov_1.167568_g6779_i0 | PRJNA864829 | 6865 | 234 | 1.167568 | 2.73210912 | Williamsia sp. CHRR-6 | 2835871 | Bacteria | Bacteria | 43.1 | 0.0243 | NR | WP_214242464.1 | 2835871 | g6779 | i0 | 29.8 | 1.07692307692308 | 84 | 51 | 97.4 | 1 | 233 | 6 | 427 | 510 | WP_214242464.1 bifunctional FO biosynthesis protein CofGH [Williamsia sp. CHRR-6] | diamond | 252 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Williamsia | Williamsia sp. CHRR-6 | ||
| 28129101 | 28129101 | PRJNA864829_S_NODE_12485_length_181_cov_1.689394_g12399_i0 | PRJNA864829 | 12485 | 181 | 1.689394 | 3.05780314 | Tessaracoccus palaemonis | 2829499 | Bacteria | Bacteria | 41.6 | 0.0431 | NR | WP_219082952.1 | 2829499 | g12399 | i0 | 46.6 | 0.961325966850829 | 58 | 24 | 87.8 | 3 | 20 | 178 | 255 | 310 | WP_219082952.1 CHAT domain-containing protein [Tessaracoccus palaemonis] | diamond | 174 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Tessaracoccus | Tessaracoccus palaemonis | ||
| 28476309 | 28476309 | PRJNA864829_S_NODE_3026_length_316_cov_1.333333_g2940_i0 | PRJNA864829 | 3026 | 316 | 1.333333 | 4.21333228 | Candidatus Nanopelagicaceae bacterium | 2518609 | Bacteria | Bacteria | 43.5 | 0.0433 | NR | HEY3293697.1 | 2518609 | g2940 | i0 | 41.4 | 0.550632911392405 | 58 | 32 | 53.2 | 2 | 144 | 311 | 257 | 314 | HEY3293697.1 MFS transporter [Candidatus Nanopelagicaceae bacterium] | diamond | 174 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Candidatus Nanopelagicales | Candidatus Nanopelagicaceae | Candidatus Nanopelagicaceae bacterium | |||
| 29044807 | 29044807 | PRJNA864829_S_NODE_13168_length_177_cov_1.171875_g13082_i0 | PRJNA864829 | 13168 | 177 | 1.171875 | 2.07421875 | Streptomyces sp. CG1 | 1287523 | Bacteria | Bacteria | 88.2 | 1.54e-18 | NR | WP_369387666.1 | 1287523 | g13082 | i0 | 64.4 | 1 | 59 | 21 | 100 | 0 | 1 | 177 | 382 | 440 | WP_369387666.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Streptomyces sp. CG1] | diamond | 177 | 88.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. CG1 | ||
| 29360418 | 29360418 | PRJNA864829_S_NODE_14069_length_172_cov_0.869919_g13983_i0 | PRJNA864829 | 14069 | 172 | 0.869919 | 1.49626068 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 71.6 | 9.36e-13 | NR | HMF04966.1 | 2080302 | g13983 | i0 | 67.3 | 0.959302325581395 | 55 | 17 | 95.9 | 1 | 171 | 7 | 865 | 918 | HMF04966.1 hypothetical protein [Acidimicrobiia bacterium] | diamond | 165 | 71.6 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 29549624 | 29549624 | PRJNA864829_S_NODE_3050_length_315_cov_1.815789_g2964_i0 | PRJNA864829 | 3050 | 315 | 1.815789 | 5.71973535 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 46.6 | 0.00383 | NR | MBS1844574.1 | 2900548 | g2964 | i0 | 35.9 | 0.60952380952381 | 64 | 41 | 61 | 0 | 14 | 205 | 311 | 374 | MBS1844574.1 cation-transporting P-type ATPase [Actinomycetota bacterium] | diamond | 192 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 30789921 | 30789921 | PRJNA864829_S_NODE_10894_length_192_cov_2.734266_g10808_i0 | PRJNA864829 | 10894 | 192 | 2.734266 | 5.24979072 | Mycobacterium | 1763 | Bacteria | Bacteria | 43.5 | 0.00172 | NR | WP_306237356.1 | 1763 | g10808 | i0 | 65.5 | 1.359375 | 29 | 10 | 45.3 | 0 | 190 | 104 | 55 | 83 | WP_306237356.1 MULTISPECIES: hypothetical protein [Mycobacterium] | diamond | 261 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | |||
| 32236826 | 32236826 | PRJNA864829_S_NODE_15178_length_167_cov_1.745763_g15092_i0 | PRJNA864829 | 15178 | 167 | 1.745763 | 2.91542421 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 77.8 | 7.9e-17 | NR | HET9543341.1 | 2201156 | g15092 | i0 | 72.2 | 2.89221556886228 | 54 | 15 | 97 | 0 | 4 | 165 | 2 | 55 | HET9543341.1 TfoX/Sxy family protein [Acidimicrobiales bacterium] | diamond | 483 | 77.8 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 32553163 | 32553163 | PRJNA864829_S_NODE_12319_length_182_cov_2.368421_g12233_i0 | PRJNA864829 | 12319 | 182 | 2.368421 | 4.31052622 | Streptomyces atroolivaceus | 66869 | Bacteria | Bacteria | 40 | 0.0258 | NR | WP_382206025.1 | 66869 | g12233 | i0 | 60.7 | 0.461538461538462 | 28 | 9 | 42.9 | 1 | 124 | 47 | 7 | 34 | WP_382206025.1 hypothetical protein [Streptomyces atroolivaceus] | diamond | 84 | 40 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces atroolivaceus | ||
| 32773228 | 32773228 | PRJNA864829_S_NODE_4360_length_278_cov_2.170306_g4274_i0 | PRJNA864829 | 4360 | 278 | 2.170306 | 6.03345068 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 61.6 | 1.27e-8 | NR | NLA37054.1 | 2900548 | g4274 | i0 | 61.5 | 2.80575539568345 | 52 | 12 | 56.1 | 2 | 275 | 120 | 411 | 454 | NLA37054.1 citramalate synthase [Actinomycetota bacterium] | diamond | 780 | 61.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 32867739 | 32867739 | PRJNA864829_S_NODE_8140_length_217_cov_2.136905_g8054_i0 | PRJNA864829 | 8140 | 217 | 2.136905 | 4.63708385 | Mycobacterium szulgai | 1787 | Bacteria | Bacteria | 140 | 5.6899999999999995e-37 | NR | WP_085668827.1 | 1787 | g8054 | i0 | 100 | 0.981566820276498 | 71 | 0 | 98.2 | 0 | 215 | 3 | 576 | 646 | WP_085668827.1 hypothetical protein [Mycobacterium szulgai] | diamond | 213 | 140 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium szulgai |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;