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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA861969" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA861969 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
846251 846251 PRJNA861969_P_NODE_23741_length_281_cov_1.480769_g23510_i0 PRJNA861969 23741 281 1.480769 4.16096089 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 136 2.98e-36   NR MFA5582961.1 2081706 g23510 i0 84.9 1.98576512455516 93 12 99.3 2 3 281 137 227 MFA5582961.1 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [Bacteriovoracaceae bacterium] diamond 558 136 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
26706634 26706634 PRJNA861969_P_NODE_26101_length_270_cov_1.807107_g25870_i0 PRJNA861969 26101 270 1.807107 4.8791889 Bacteriovoracia bacterium 3058048 Bacteria Bacteria 75.1 1.12e-13   NR MFP5386446.1 3058048 g25870 i0 60.3 1.43333333333333 63 25 70 0 9 197 249 311 MFP5386446.1 LysR substrate-binding domain-containing protein [Bacteriovoracia bacterium] diamond 387 75.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia       Bacteriovoracia bacterium
27094856 27094856 PRJNA861969_P_NODE_32922_length_249_cov_0.875000_g32691_i0 PRJNA861969 32922 249 0.875 2.17875 Peredibacter 263370 Bacteria Bacteria 108 1.42e-27   NR WP_321398410.1 28202 g32691 i0 92.5 1.27710843373494 53 4 63.9 0 91 249 1 53 WP_321398410.1 hypothetical protein [Peredibacter starrii] diamond 318 109 0.990825688073395 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
28255155 28255155 PRJNA861969_P_NODE_38966_length_243_cov_1.541176_g38735_i0 PRJNA861969 38966 243 1.541176 3.74505768 Bacteriovoracia bacterium 3058048 Bacteria Bacteria 120 7.22e-33   NR MFP5385619.1 3058048 g38735 i0 82.6 0.851851851851852 69 12 85.2 0 241 35 62 130 MFP5385619.1 Cu(I)-responsive transcriptional regulator [Bacteriovoracia bacterium] diamond 207 120 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia       Bacteriovoracia bacterium
29644124 29644124 PRJNA861969_P_NODE_40250_length_242_cov_0.911243_g40019_i0 PRJNA861969 40250 242 0.911243 2.20520806 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 64.3 5.78e-10   NR PZP57409.1 349221 g40019 i0 50.8 0.756198347107438 61 28 75.6 1 223 41 29 87 PZP57409.1 MAG: hypothetical protein DI586_00525 [Micavibrio aeruginosavorus] diamond 183 64.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
30466143 30466143 PRJNA861969_P_NODE_35213_length_247_cov_0.885057_g34982_i0 PRJNA861969 35213 247 0.885057 2.18609079 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 131 6.82e-35   NR MFA5582641.1 2081706 g34982 i0 81.9 3.02429149797571 83 14 99.6 1 1 246 86 168 MFA5582641.1 FAD-dependent oxidoreductase [Bacteriovoracaceae bacterium] diamond 747 131 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
30623641 30623641 PRJNA861969_P_NODE_38133_length_244_cov_0.900585_g37902_i0 PRJNA861969 38133 244 0.900585 2.1974274 Oligoflexia bacterium 2599941 Bacteria Bacteria 72.4 2.29e-13   NR MBC7397709.1 2599941 g37902 i0 64.7 1.61065573770492 51 18 62.7 0 92 244 67 117 MBC7397709.1 class I SAM-dependent methyltransferase [Oligoflexia bacterium] diamond 393 72.4 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
31318996 31318996 PRJNA861969_P_NODE_21855_length_290_cov_1.285714_g21624_i0 PRJNA861969 21855 290 1.285714 3.7285706 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 109 1.01e-28   NR HLT23004.1 2081706 g21624 i0 84.4 0.662068965517241 64 10 66.2 0 3 194 36 99 HLT23004.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 192 109 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
31983211 31983211 PRJNA861969_P_NODE_38118_length_244_cov_0.900585_g37887_i0 PRJNA861969 38118 244 0.900585 2.1974274 Peredibacter starrii 28202 Bacteria Bacteria 91.3 5.33e-20   NR WP_321397156.1 28202 g37887 i0 53.1 0.995901639344262 81 37 99.6 1 244 2 159 238 WP_321397156.1 hypothetical protein [Peredibacter starrii] diamond 243 91.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
32118149 32118149 PRJNA861969_P_NODE_28158_length_261_cov_1.638298_g27927_i0 PRJNA861969 28158 261 1.638298 4.27595778 Pseudomonadati 3379134 Bacteria Bacteria 60.1 2.21e-8   NR WP_132326157.1 1513793 g27927 i0 45 1.40229885057471 60 33 69 0 260 81 195 254 WP_132326157.1 ABC transporter permease subunit [Pseudobacteriovorax antillogorgiicola] diamond 366 60.5 0.993388429752066 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Pseudobacteriovoracaceae Pseudobacteriovorax Pseudobacteriovorax antillogorgiicola
32615886 32615886 PRJNA861969_P_NODE_25760_length_272_cov_1.356784_g25529_i0 PRJNA861969 25760 272 1.356784 3.69045248 Oligoflexus sp. 1971216 Bacteria Bacteria 124 1.8799999999999999e-31   NR MBC7530114.1 1971216 g25529 i0 65.6 0.992647058823529 90 31 99.3 0 270 1 346 435 MBC7530114.1 isochorismate synthase [Oligoflexus sp.] diamond 270 124 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
32899105 32899105 PRJNA861969_P_NODE_36780_length_245_cov_1.790698_g36549_i0 PRJNA861969 36780 245 1.790698 4.3872101 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 115 4.26e-28   NR HLT22217.1 2081706 g36549 i0 64.2 0.991836734693878 81 29 99.2 0 3 245 57 137 HLT22217.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 243 115 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;