RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA859990" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 4 ✖

bioproject 1

  • PRJNA859990 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27118085 27118085 PRJNA859990_S_NODE_17082_length_255_cov_1.252747_g16821_i0 PRJNA859990 17082 255 1.252747 3.19450485 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 93.6 3.32e-21   NR TFG98658.1 2053491 g16821 i0 54.1 1 85 38 98.8 1 3 254 14 98 TFG98658.1 MAG: hypothetical protein E4H12_05440 [Candidatus Thorarchaeota archaeon] diamond 255 93.6 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
29273596 29273596 PRJNA859990_S_NODE_21669_length_242_cov_0.911243_g21408_i0 PRJNA859990 21669 242 0.911243 2.20520806 Thermoproteati 1783275 Archaea Archaea 46.2 0.00204   NR MBS7611509.1 2026714 g21408 i0 84.6 4.25206611570248 26 4 32.2 0 237 160 272 297 MBS7611509.1 FAD-dependent oxidoreductase [Candidatus Bathyarchaeota archaeon] diamond 1029 46.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30623636 30623636 PRJNA859990_S_NODE_22273_length_241_cov_0.880952_g22012_i0 PRJNA859990 22273 241 0.880952 2.12309432 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 64.3 1.27e-10   NR HUO62002.1 3045160 g22012 i0 44 1.76763485477178 75 42 93.4 0 14 238 79 153 HUO62002.1 hypothetical protein [Candidatus Bathyarchaeia archaeon] diamond 426 64.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
31888285 31888285 PRJNA859990_S_NODE_11177_length_306_cov_1.210300_g10916_i0 PRJNA859990 11177 306 1.2103 3.703518 archaeon 1906665 Archaea Archaea 97.8 3.129999999999999e-23   NR NCP98210.1 1906665 g10916 i0 55.3 0.833333333333333 85 37 83.3 1 52 306 1 84 NCP98210.1 transcription termination/antitermination protein NusG [archaeon] diamond 255 97.8 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;