RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA859990" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA859990 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26746374 26746374 PRJNA859990_S_NODE_21981_length_241_cov_1.583333_g21720_i0 PRJNA859990 21981 241 1.583333 3.8158325299999998 Basidiomycota 5204 Fungi Fungi 50.8 5.23e-5   NR KAK0567960.1 155126 g21720 i0 42.9 3.90871369294606 77 39 95.9 2 231 1 633 704 KAK0567960.1 hypothetical protein OC861_002411 [Tilletia horrida] diamond 942 50.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia horrida
27687308 27687308 PRJNA859990_S_NODE_19044_length_248_cov_0.880000_g18783_i0 PRJNA859990 19044 248 0.88 2.1824 Testicularia cyperi 1882483 Fungi Fungi 93.2 6.97e-20   NR PWZ02367.1 1882483 g18783 i0 57.3 0.991935483870968 82 23 99.2 2 2 247 509 578 PWZ02367.1 CLPTM1-domain-containing protein [Testicularia cyperi] diamond 246 93.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Anthracoideaceae Testicularia Testicularia cyperi
28286622 28286622 PRJNA859990_S_NODE_21326_length_243_cov_0.888235_g21065_i0 PRJNA859990 21326 243 0.888235 2.15841105 Rhizoctonia solani 456999 Fungi Fungi 153 5.63e-41   NR CAE7226744.1 456999 g21065 i0 100 0.987654320987654 80 0 98.8 0 241 2 458 537 CAE7226744.1 unnamed protein product, partial [Rhizoctonia solani] diamond 240 153 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
29842108 29842108 PRJNA859990_S_NODE_19391_length_247_cov_0.885057_g19130_i0 PRJNA859990 19391 247 0.885057 2.18609079 Ustilaginomycetes 5257 Fungi Fungi 50.4 7.55e-5   NR XP_007882196.1 1277687 g19130 i0 64.7 2.30769230769231 34 12 41.3 0 106 5 457 490 XP_007882196.1 uncharacterized protein PFL1_06464 [Pseudozyma flocculosa PF-1] diamond 570 50.8 0.992125984251969 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
29928920 29928920 PRJNA859990_S_NODE_19471_length_247_cov_0.885057_g19210_i0 PRJNA859990 19471 247 0.885057 2.18609079 Grifola frondosa 5627 Fungi Fungi 160 9.98e-44   NR OBZ72764.1 5627 g19210 i0 92.7 0.995951417004049 82 6 99.6 0 1 246 661 742 OBZ72764.1 Extracellular metalloproteinase [Grifola frondosa] diamond 246 160 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Grifolaceae Grifola Grifola frondosa
31192155 31192155 PRJNA859990_S_NODE_20855_length_244_cov_0.877193_g20594_i0 PRJNA859990 20855 244 0.877193 2.14035092 Violaceomyces palustris 1673888 Fungi Fungi 86.7 1.28e-17   NR PWN52203.1 1673888 g20594 i0 55 0.983606557377049 80 36 98.4 0 3 242 101 180 PWN52203.1 hypothetical protein IE53DRAFT_385362, partial [Violaceomyces palustris] diamond 240 86.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Violaceomycetales Violaceomycetaceae Violaceomyces Violaceomyces palustris
32331730 32331730 PRJNA859990_S_NODE_20199_length_245_cov_1.052326_g19938_i0 PRJNA859990 20199 245 1.052326 2.5781987 Mycosarcoma maydis 5270 Fungi Fungi 75.9 2.5e-14   NR XP_011386059.1 5270 g19938 i0 72.5 2.48571428571429 51 14 62.4 0 243 91 211 261 XP_011386059.1 uncharacterized protein UMAG_00095 [Mycosarcoma maydis] diamond 609 75.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Mycosarcoma Mycosarcoma maydis
32394722 32394722 PRJNA859990_S_NODE_16319_length_260_cov_0.941176_g16058_i0 PRJNA859990 16319 260 0.941176 2.4470576 Botryobasidium botryosum FD-172 SS1 930990 Fungi Fungi 42.7 0.0468   NR KDQ15921.1 930990 g16058 i0 41.8 0.634615384615385 55 32 63.5 0 233 69 949 1003 KDQ15921.1 hypothetical protein BOTBODRAFT_173584 [Botryobasidium botryosum FD-172 SS1] diamond 165 42.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Botryobasidiaceae Botryobasidium Botryobasidium botryosum
32489736 32489736 PRJNA859990_S_NODE_18879_length_248_cov_1.405714_g18618_i0 PRJNA859990 18879 248 1.405714 3.48617072 Meira miltonrushii 1280837 Fungi Fungi 105 3.62e-27   NR XP_025353847.1 1280837 g18618 i0 65.3 0.907258064516129 75 26 90.7 0 246 22 44 118 XP_025353847.1 MAT1-domain-containing protein, partial [Meira miltonrushii] diamond 225 105 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Brachybasidiaceae Meira Meira miltonrushii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;