RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA859990" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA859990 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26706631 26706631 PRJNA859990_S_NODE_22201_length_241_cov_0.916667_g21940_i0 PRJNA859990 22201 241 0.916667 2.20916747 Pseudolycoriella hygida 35572 Arthropoda Arthropoda 115 7.29e-28   NR KAJ6646900.1 35572 g21940 i0 78.8 1.9792531120332 80 17 99.6 0 241 2 349 428 KAJ6646900.1 Lamin Dm0 [Pseudolycoriella hygida] diamond 477 115 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Sciaridae Pseudolycoriella Pseudolycoriella hygida
27276459 27276459 PRJNA859990_S_NODE_20303_length_245_cov_0.895349_g20042_i0 PRJNA859990 20303 245 0.895349 2.19360505 Portunus trituberculatus 210409 Arthropoda Arthropoda 90.5 1.69e-21   NR MPC07756.1 210409 g20042 i0 79.2 0.648979591836735 53 11 64.9 0 76 234 19 71 MPC07756.1 hypothetical protein [Portunus trituberculatus] diamond 159 90.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Malacostraca Decapoda Portunidae Portunus Portunus trituberculatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;