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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA859990" and tax_kingdom = "Fusobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Fusobacteriati · 12 ✖

bioproject 1

  • PRJNA859990 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5949200 5949200 PRJNA859990_S_NODE_18365_length_250_cov_0.864407_g18104_i0 PRJNA859990 18365 250 0.864407 2.1610175 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 110 1.63e-26   NR WP_047384911.1 1340502 g18104 i0 100 1.296 54 0 64.8 0 164 3 1 54 WP_047384911.1 HTH domain-containing protein [Cetobacterium sp. ZWU0022] diamond 324 110 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
14873774 14873774 PRJNA859990_S_NODE_11272_length_305_cov_1.297414_g11011_i0 PRJNA859990 11272 305 1.297414 3.9571127 Cetobacterium sp. ZWU 2071632 Bacteria Bacteria 202 2.24e-64   NR WP_052191665.1 1340502 g11011 i0 100 0.99344262295082 101 0 99.3 0 303 1 24 124 WP_052191665.1 pyridoxamine 5'-phosphate oxidase family protein [Cetobacterium sp. ZWU0022] diamond 303 202 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZWU0022
26833670 26833670 PRJNA859990_S_NODE_11681_length_300_cov_1.797357_g11420_i0 PRJNA859990 11681 300 1.797357 5.392071 Cetobacterium sp. 2071632 Bacteria Bacteria 163 1.69e-46   NR WP_291941149.1 2071632 g11420 i0 83.8 0.99 99 16 99 0 2 298 29 127 WP_291941149.1 hypothetical protein [Cetobacterium sp.] diamond 297 163 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp.
27663654 27663654 PRJNA859990_S_NODE_21964_length_241_cov_1.755952_g21703_i0 PRJNA859990 21964 241 1.755952 4.23184432 Bacteria 2 Bacteria Bacteria 57.4 2.38e-7   NR WP_235243032.1 850 g21703 i0 45.2 7.25726141078838 73 40 90.9 0 236 18 53 125 WP_235243032.1 polysaccharide biosynthesis protein [Fusobacterium mortiferum] diamond 1749 57.8 0.993079584775087 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Fusobacterium Fusobacterium mortiferum
28665850 28665850 PRJNA859990_S_NODE_18007_length_251_cov_0.865169_g17746_i0 PRJNA859990 18007 251 0.865169 2.17157419 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 146 3.06e-41   NR WP_047396435.1 1339239 g17746 i0 88 0.99203187250996006 83 10 99.2 0 250 2 33 115 WP_047396435.1 DNA-binding protein WhiA [Cetobacterium sp. ZOR0034] diamond 249 146 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
29202614 29202614 PRJNA859990_S_NODE_9469_length_329_cov_1.402344_g9208_i0 PRJNA859990 9469 329 1.402344 4.61371176 unclassified Cetobacterium 2630983 Bacteria Bacteria 204 1.04e-63   NR WP_231549775.1 2630983 g9208 i0 98.2 0.993920972644377 109 2 99.4 0 3 329 23 131 WP_231549775.1 MULTISPECIES: PstS family phosphate ABC transporter substrate-binding protein [unclassified Cetobacterium] diamond 327 204 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29549610 29549610 PRJNA859990_S_NODE_18270_length_250_cov_0.870056_g18009_i0 PRJNA859990 18270 250 0.870056 2.17514 unclassified Cetobacterium 2630983 Bacteria Bacteria 161 1.5699999999999998e-47   NR WP_047384032.1 2630983 g18009 i0 100 0.996 83 0 99.6 0 250 2 169 251 WP_047384032.1 MULTISPECIES: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [unclassified Cetobacterium] diamond 249 161 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
29644113 29644113 PRJNA859990_S_NODE_20790_length_244_cov_0.900585_g20529_i0 PRJNA859990 20790 244 0.900585 2.1974274 Leptotrichiaceae bacterium 2782225 Bacteria Bacteria 140 7.11e-39   NR MDO5088515.1 2782225 g20529 i0 87.7 2.96311475409836 81 10 99.6 0 1 243 176 256 MDO5088515.1 ABC transporter ATP-binding protein [Leptotrichiaceae bacterium] diamond 723 140 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Leptotrichiaceae   Leptotrichiaceae bacterium
29897254 29897254 PRJNA859990_S_NODE_6171_length_397_cov_1.435185_g5910_i0 PRJNA859990 6171 397 1.435185 5.69768445 Cetobacterium sp. ZOR 2071632 Bacteria Bacteria 259 1.4699999999999996e-81   NR WP_047393897.1 1339239 g5910 i0 98.5 0.98992443324937 131 2 99 0 395 3 272 402 WP_047393897.1 S1 RNA-binding domain-containing protein [Cetobacterium sp. ZOR0034] diamond 393 259 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium sp. ZOR0034
31160578 31160578 PRJNA859990_S_NODE_16655_length_258_cov_1.021622_g16394_i0 PRJNA859990 16655 258 1.021622 2.63578476 Cetobacterium somerae 188913 Bacteria Bacteria 114 1.54e-28   NR WP_240218917.1 188913 g16394 i0 68.3 0.953488372093023 82 26 95.3 0 257 12 36 117 WP_240218917.1 hypothetical protein [Cetobacterium somerae] diamond 246 114 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium Cetobacterium somerae
31540530 31540530 PRJNA859990_S_NODE_20236_length_245_cov_0.895349_g19975_i0 PRJNA859990 20236 245 0.895349 2.19360505 unclassified Cetobacterium 2630983 Bacteria Bacteria 155 2.7899999999999993e-43   NR WP_047380808.1 2630983 g19975 i0 100 2.97551020408163 81 0 99.2 0 243 1 123 203 WP_047380808.1 MULTISPECIES: thymidine phosphorylase [unclassified Cetobacterium] diamond 729 155 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  
32742000 32742000 PRJNA859990_S_NODE_22120_length_241_cov_0.916667_g21859_i0 PRJNA859990 22120 241 0.916667 2.20916747 unclassified Cetobacterium 2630983 Bacteria Bacteria 161 4.8499999999999995e-45   NR WP_047380774.1 2630983 g21859 i0 100 0.995850622406639 80 0 99.6 0 240 1 432 511 WP_047380774.1 MULTISPECIES: glycine betaine ABC transporter substrate-binding protein [unclassified Cetobacterium] diamond 240 161 1 Bacteria   Fusobacteriati Fusobacteriota Fusobacteriia Fusobacteriales Fusobacteriaceae Cetobacterium  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;