RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA855894" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA855894 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19968390 19968390 PRJNA855894_P_NODE_13456_length_423_cov_1.980000_g13334_i0 PRJNA855894 13456 423 1.98 8.3754 Erysiphe necator associated narnavirus 3 2695336 Viruses Viruses 186 8.42e-53   NR QJT93762.1 2736387 g13334 i0 66.7 1 141 46 99.3 1 421 2 340 480 QJT93762.1 RNA-dependent RNA polymerase [Erysiphe necator associated narnavirus 30] diamond 423 186 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Erysiphe necator associated narnavirus 30
29391984 29391984 PRJNA855894_P_NODE_2969_length_959_cov_2.811512_g2878_i0 PRJNA855894 2969 959 2.811512 26.96240008 Cryphonectria naterciae splipalmivirus 1 2841740 Viruses Viruses 103 4.3499999999999997e-23   NR BCX55511.1 2841740 g2878 i0 69.7 0.237747653806048 76 22 23.8 1 2 229 82 156 BCX55511.1 hypothetical protein 1 [Cryphonectria naterciae splipalmivirus 1] diamond 228 103 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Splipalmiviridae Divipalmivirus Divipalmivirus cryphonectriae
32804683 32804683 PRJNA855894_P_NODE_17980_length_358_cov_1.533333_g17858_i0 PRJNA855894 17980 358 1.533333 5.48933214 Grapevine wood holobiome associated narna-like virus 18 3398654 Viruses Viruses 78.2 1.98e-15   NR XOD45389.1 3398654 g17858 i0 51.8 1.39106145251397 85 36 67 1 113 352 1 85 XOD45389.1 HP1 [Grapevine wood holobiome associated narna-like virus 18] diamond 498 78.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Grapevine wood holobiome associated narna-like virus 18

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;