RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA855894" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA855894 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31255727 31255727 PRJNA855894_P_NODE_30275_length_250_cov_0.870056_g30153_i0 PRJNA855894 30275 250 0.870056 2.17514 Chitinophagaceae 563835 Bacteria Bacteria 110 5.62e-29   NR WP_330975041.1 563835 g30153 i0 59 0.996 83 34 99.6 0 249 1 44 126 WP_330975041.1 MULTISPECIES: hypothetical protein [Chitinophagaceae] diamond 249 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae    
32867678 32867678 PRJNA855894_P_NODE_33200_length_244_cov_0.900585_g33078_i0 PRJNA855894 33200 244 0.900585 2.1974274 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 68.6 2.97e-11   NR NOS91015.1 2099675 g33078 i0 43.4 0.934426229508197 76 43 93.4 0 1 228 232 307 NOS91015.1 hypothetical protein [Cyclobacteriaceae bacterium] diamond 228 68.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;