RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA855894" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA855894 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27970995 27970995 PRJNA855894_P_NODE_33725_length_243_cov_0.905882_g33603_i0 PRJNA855894 33725 243 0.905882 2.20129326 Bemisia tabaci 7038 Arthropoda Arthropoda 44.7 0.00291   NR CAH0392752.1 7038 g33603 i0 69 0.358024691358025 29 9 35.8 0 132 218 108 136 CAH0392752.1 unnamed protein product [Bemisia tabaci] diamond 87 44.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aleyrodidae Bemisia Bemisia tabaci
31097557 31097557 PRJNA855894_P_NODE_27235_length_270_cov_1.050761_g27113_i0 PRJNA855894 27235 270 1.050761 2.8370547 Tyrophagus putrescentiae 59818 Arthropoda Arthropoda 115 1.03e-27   NR KAH9409313.1 59818 g27113 i0 93.7 0.877777777777778 79 5 87.8 0 237 1 1 79 KAH9409313.1 26S protease regulatory subunit 7 [Tyrophagus putrescentiae] diamond 237 115 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Acaridae Tyrophagus Tyrophagus putrescentiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;