RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA853203" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA853203 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7219650 7219650 PRJNA853203_P_NODE_36966_length_247_cov_1.793103_g36817_i0 PRJNA853203 36966 247 1.793103 4.42896441 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 65.5 2.4e-11   NR MCK9475645.1 2053465 g36817 i0 59.6 1.31174089068826 57 23 69.2 0 75 245 13 69 MCK9475645.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 324 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
31192091 31192091 PRJNA853203_P_NODE_5835_length_322_cov_1.253012_g5686_i0 PRJNA853203 5835 322 1.253012 4.03469864 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 70.5 1.71e-11   NR MCK9476368.1 2053465 g5686 i0 44.2 0.968944099378882 104 47 93.2 4 21 320 753 849 MCK9476368.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 312 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;