RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA853203" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853203 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28539587 28539587 PRJNA853203_P_NODE_15027_length_277_cov_1.397059_g14878_i0 PRJNA853203 15027 277 1.397059 3.86985343 Aliifodinibius salipaludis 2032627 Bacteria Bacteria 182 1.9199999999999993e-52   NR WP_095606991.1 2032627 g14878 i0 91.3 2.98916967509025 92 8 99.6 0 2 277 436 527 WP_095606991.1 amidohydrolase [Aliifodinibius salipaludis] diamond 828 182 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius salipaludis
32371303 32371303 PRJNA853203_P_NODE_31439_length_250_cov_1.762712_g31290_i0 PRJNA853203 31439 250 1.762712 4.40678 Fodinibius 1397106 Bacteria Bacteria 157 3.56e-44   NR WP_165265605.1 1736908 g31290 i0 97.6 5.904 82 2 98.4 0 248 3 148 229 WP_165265605.1 beta-ketoacyl-ACP synthase II [Fodinibius halophilus] diamond 1476 157 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius halophilus
32907272 32907272 PRJNA853203_P_NODE_40260_length_246_cov_0.901734_g40111_i0 PRJNA853203 40260 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 45.4 0.0041   NR MEX0719824.1 2053516 g40111 i0 48.8 1.04878048780488 43 22 52.4 0 245 117 339 381 MEX0719824.1 AAA family ATPase [Balneolaceae bacterium] diamond 258 45.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;