contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA853194" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27276375 | 27276375 | PRJNA853194_S_NODE_54683_length_295_cov_1.364865_g53592_i0 | PRJNA853194 | 54683 | 295 | 1.364865 | 4.02635175 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 113 | 3.4600000000000003e-29 | NR | WP_112665591.1 | 65123 | g53592 | i0 | 68.3 | 0.833898305084746 | 82 | 25 | 82.4 | 1 | 265 | 23 | 61 | 142 | WP_112665591.1 hypothetical protein [Mycoplasma wenyonii] | diamond | 246 | 113 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 27339631 | 27339631 | PRJNA853194_S_NODE_48043_length_313_cov_1.283333_g46952_i0 | PRJNA853194 | 48043 | 313 | 1.283333 | 4.01683229 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 204 | 1.28e-63 | NR | WP_112665762.1 | 65123 | g46952 | i0 | 98.1 | 0.996805111821086 | 104 | 2 | 99.7 | 0 | 313 | 2 | 113 | 216 | WP_112665762.1 class II fructose-1,6-bisphosphate aldolase [Mycoplasma wenyonii] | diamond | 312 | 204 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 27687214 | 27687214 | PRJNA853194_S_NODE_56344_length_291_cov_1.385321_g55253_i0 | PRJNA853194 | 56344 | 291 | 1.385321 | 4.03128411 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 65.5 | 1.35e-10 | NR | WP_112664965.1 | 65123 | g55253 | i0 | 88.6 | 0.360824742268041 | 35 | 4 | 36.1 | 0 | 72 | 176 | 1 | 35 | WP_112664965.1 restriction endonuclease PLD domain-containing protein [Mycoplasma wenyonii] | diamond | 105 | 65.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 27750218 | 27750218 | PRJNA853194_S_NODE_47364_length_315_cov_1.549587_g46273_i0 | PRJNA853194 | 47364 | 315 | 1.549587 | 4.88119905 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 188 | 4.55e-58 | NR | WP_112665247.1 | 65123 | g46273 | i0 | 97.1 | 0.990476190476191 | 104 | 3 | 99 | 0 | 313 | 2 | 32 | 135 | WP_112665247.1 RluA family pseudouridine synthase [Mycoplasma wenyonii] | diamond | 312 | 188 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 28255050 | 28255050 | PRJNA853194_S_NODE_53506_length_298_cov_1.315556_g52415_i0 | PRJNA853194 | 53506 | 298 | 1.315556 | 3.92035688 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 142 | 4.78e-38 | NR | WP_187150753.1 | 432608 | g52415 | i0 | 72.5 | 1.83221476510067 | 91 | 25 | 91.6 | 0 | 3 | 275 | 25 | 115 | WP_187150753.1 hypothetical protein [Candidatus Mycoplasma haematobovis] | diamond | 546 | 142 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis | ||
| 28981571 | 28981571 | PRJNA853194_S_NODE_67268_length_268_cov_1.051282_g66177_i0 | PRJNA853194 | 67268 | 268 | 1.051282 | 2.81743576 | Mycoplasma ovis | 171632 | Bacteria | Bacteria | 129 | 2.26e-32 | NR | WP_024071642.1 | 171632 | g66177 | i0 | 76.2 | 0.940298507462687 | 84 | 20 | 94 | 0 | 254 | 3 | 54 | 137 | WP_024071642.1 type I DNA topoisomerase [Mycoplasma ovis] | diamond | 252 | 129 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma ovis | ||
| 29265344 | 29265344 | PRJNA853194_S_NODE_59789_length_283_cov_1.804762_g58698_i0 | PRJNA853194 | 59789 | 283 | 1.804762 | 5.10747646 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 166 | 5.61e-48 | NR | WP_112665229.1 | 65123 | g58698 | i0 | 88.3 | 0.996466431095406 | 94 | 11 | 99.6 | 0 | 1 | 282 | 113 | 206 | WP_112665229.1 methionine adenosyltransferase domain-containing protein [Mycoplasma wenyonii] | diamond | 282 | 166 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 29707141 | 29707141 | PRJNA853194_S_NODE_69030_length_264_cov_2.015707_g67939_i0 | PRJNA853194 | 69030 | 264 | 2.015707 | 5.32146648 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 131 | 1.02e-36 | NR | WP_187150369.1 | 432608 | g67939 | i0 | 86.4 | 0.920454545454545 | 81 | 11 | 92 | 0 | 245 | 3 | 1 | 81 | WP_187150369.1 hypothetical protein [Candidatus Mycoplasma haematobovis] | diamond | 243 | 131 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis | ||
| 30781670 | 30781670 | PRJNA853194_S_NODE_51814_length_302_cov_2.353712_g50723_i0 | PRJNA853194 | 51814 | 302 | 2.353712 | 7.10821024 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 184 | 1.09e-51 | NR | WP_245633501.1 | 432608 | g50723 | i0 | 100 | 0.993377483443709 | 100 | 0 | 99.3 | 0 | 300 | 1 | 352 | 451 | WP_245633501.1 DNA gyrase/topoisomerase IV subunit A [Candidatus Mycoplasma haematobovis] | diamond | 300 | 184 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis | ||
| 31318887 | 31318887 | PRJNA853194_S_NODE_48975_length_310_cov_1.974684_g47884_i0 | PRJNA853194 | 48975 | 310 | 1.974684 | 6.1215204 | Candidatus Mycoplasma haematobovis | 432608 | Bacteria | Bacteria | 61.2 | 2.75e-8 | NR | WP_187150740.1 | 432608 | g47884 | i0 | 59.6 | 0.503225806451613 | 52 | 21 | 50.3 | 0 | 160 | 5 | 1073 | 1124 | WP_187150740.1 hypothetical protein [Candidatus Mycoplasma haematobovis] | diamond | 156 | 61.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Candidatus Mycoplasma haematobovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;