contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA853194" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29518049 | 29518049 | PRJNA853194_S_NODE_68790_length_265_cov_1.151042_g67699_i0 | PRJNA853194 | 68790 | 265 | 1.151042 | 3.0502613 | Sinomonas cellulolyticus | 2801916 | Bacteria | Bacteria | 43.5 | 0.0254 | NR | WP_189693105.1 | 2801916 | g67699 | i0 | 35.5 | 0.860377358490566 | 76 | 42 | 86 | 1 | 32 | 259 | 97 | 165 | WP_189693105.1 glycosyltransferase 87 family protein [Sinomonas cellulolyticus] | diamond | 228 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Sinomonas | Sinomonas cellulolyticus | ||
| 29833867 | 29833867 | PRJNA853194_S_NODE_65011_length_272_cov_1.663317_g63920_i0 | PRJNA853194 | 65011 | 272 | 1.663317 | 4.52422224 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 44.3 | 0.0157 | NR | WP_399435965.1 | 3365658 | g63920 | i0 | 47.5 | 0.441176470588235 | 40 | 21 | 44.1 | 0 | 71 | 190 | 1206 | 1245 | WP_399435965.1 hypothetical protein [Streptomyces sp. NPDC051561] | diamond | 120 | 44.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC051561 | ||
| 29905424 | 29905424 | PRJNA853194_S_NODE_80631_length_246_cov_1.745665_g79540_i0 | PRJNA853194 | 80631 | 246 | 1.745665 | 4.2943359 | root | 1 | Root_unresolved | Root_unresolved | 105 | 8.870000000000001e-27 | NR | NSL78899.1 | 1902 | g79540 | i0 | 74.7 | 5.78048780487805 | 79 | 20 | 96.3 | 0 | 237 | 1 | 45 | 123 | NSL78899.1 hypothetical protein [Streptomyces coelicolor] | diamond | 1422 | 105 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces coelicolor | ||
| 30592048 | 30592048 | PRJNA853194_S_NODE_62313_length_278_cov_1.029268_g61222_i0 | PRJNA853194 | 62313 | 278 | 1.029268 | 2.86136504 | Streptomyces sp. NPDC | 1931 | Bacteria | Bacteria | 43.9 | 0.0213 | NR | WP_388990728.1 | 3364609 | g61222 | i0 | 43.2 | 0.474820143884892 | 44 | 25 | 47.5 | 0 | 174 | 43 | 118 | 161 | WP_388990728.1 serine hydroxymethyltransferase [Streptomyces sp. NPDC001796] | diamond | 132 | 43.9 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NPDC001796 | ||
| 30853087 | 30853087 | PRJNA853194_S_NODE_85094_length_241_cov_1.773810_g84003_i0 | PRJNA853194 | 85094 | 241 | 1.77381 | 4.2748821 | Streptomyces | 1883 | Bacteria | Bacteria | 42.7 | 0.0288 | NR | WP_053657044.1 | 1415544 | g84003 | i0 | 33.3 | 1.26970954356846 | 48 | 32 | 59.8 | 0 | 175 | 32 | 51 | 98 | WP_053657044.1 phosphatase PAP2 family protein [Streptomyces sp. MMG1121] | diamond | 306 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. MMG1121 | ||
| 31698509 | 31698509 | PRJNA853194_S_NODE_77617_length_250_cov_0.870056_g76526_i0 | PRJNA853194 | 77617 | 250 | 0.870056 | 2.17514 | Microbispora sp. H1 | 1898321 | Bacteria | Bacteria | 42.4 | 0.0396 | NR | WP_182879688.1 | 2729111 | g76526 | i0 | 35.7 | 0.84 | 70 | 37 | 74.4 | 3 | 9 | 194 | 123 | 192 | WP_182879688.1 hypothetical protein [Microbispora sp. H10949] | diamond | 210 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Microbispora | Microbispora sp. H10949 | ||
| 32109791 | 32109791 | PRJNA853194_S_NODE_75738_length_252_cov_1.592179_g74647_i0 | PRJNA853194 | 75738 | 252 | 1.592179 | 4.01229108 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 42 | 0.0204 | NR | MFI5040452.1 | 2201156 | g74647 | i0 | 36.4 | 0.654761904761905 | 55 | 35 | 65.5 | 0 | 27 | 191 | 19 | 73 | MFI5040452.1 hypothetical protein [Acidimicrobiales bacterium] | diamond | 165 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 32308155 | 32308155 | PRJNA853194_S_NODE_64439_length_273_cov_1.940000_g63348_i0 | PRJNA853194 | 64439 | 273 | 1.94 | 5.2962 | Acidimicrobiales | 84993 | Bacteria | Bacteria | 44.7 | 0.0104 | NR | HBZ62281.1 | 1872112 | g63348 | i0 | 37.3 | 7.13186813186813 | 59 | 36 | 64.8 | 1 | 239 | 63 | 63 | 120 | HBZ62281.1 pyruvate dehydrogenase [Acidimicrobium sp.] | diamond | 1947 | 45.1 | 0.991130820399113 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiaceae | Acidimicrobium | Acidimicrobium sp. | ||
| 32426253 | 32426253 | PRJNA853194_S_NODE_80379_length_247_cov_0.879310_g79288_i0 | PRJNA853194 | 80379 | 247 | 0.87931 | 2.1718957 | Streptosporangium sp. NPDC | 47486 | Bacteria | Bacteria | 43.1 | 0.0282 | NR | WP_362803166.1 | 3154794 | g79288 | i0 | 39.3 | 0.740890688259109 | 61 | 34 | 72.9 | 2 | 231 | 52 | 123 | 181 | WP_362803166.1 AAA family ATPase [Streptosporangium sp. NPDC023615] | diamond | 183 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Streptosporangium | Streptosporangium sp. NPDC023615 | ||
| 32489661 | 32489661 | PRJNA853194_S_NODE_62919_length_276_cov_2.906404_g61828_i0 | PRJNA853194 | 62919 | 276 | 2.906404 | 8.02167504 | Mycobacterium leprae | 1769 | Bacteria | Bacteria | 40.8 | 0.029 | NR | WP_162618264.1 | 1769 | g61828 | i0 | 35 | 0.434782608695652 | 40 | 26 | 43.5 | 0 | 56 | 175 | 11 | 50 | WP_162618264.1 hypothetical protein [Mycobacterium leprae] | diamond | 120 | 40.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium leprae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;