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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA853194" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 25 ✖

bioproject 1

  • PRJNA853194 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16537086 16537086 PRJNA853194_S_NODE_30933_length_376_cov_20.775578_g29842_i0 PRJNA853194 30933 376 20.775578 78.11617328 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 67 7.97e-12   NR HKJ06409.1 1871037 g29842 i0 44.6 2.64095744680851 83 43 66.2 2 329 81 1 80 HKJ06409.1 molybdopterin converting factor subunit 1 [Flavobacteriaceae bacterium] diamond 993 67 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
26620033 26620033 PRJNA853194_S_NODE_71301_length_260_cov_1.358289_g70210_i0 PRJNA853194 71301 260 1.358289 3.5315514 Bacteroidota 976 Bacteria Bacteria 44.3 0.0131   NR MEP7374087.1 1869212 g70210 i0 29.6 3.24230769230769 71 50 81.9 0 29 241 43 113 MEP7374087.1 S9 family peptidase [Chitinophagaceae bacterium] diamond 843 44.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
26928455 26928455 PRJNA853194_S_NODE_24042_length_416_cov_30.825073_g22951_i0 PRJNA853194 24042 416 30.825073 128.23230368 Ignavibacterium sp. 2651167 Bacteria Bacteria 93.2 1e-20   NR MFN3872034.1 2651167 g22951 i0 47.8 4.84615384615385 90 46 64.2 1 91 357 93 182 MFN3872034.1 cob(I)yrinic acid a,c-diamide adenosyltransferase [Ignavibacterium sp.] diamond 2016 93.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
26991504 26991504 PRJNA853194_S_NODE_38702_length_343_cov_3.707407_g37611_i0 PRJNA853194 38702 343 3.707407 12.71640601 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 44.7 0.0237   NR HBZ00572.1 2053527 g37611 i0 31.2 1.3469387755102 77 49 63.8 1 75 293 88 164 HBZ00572.1 hypothetical protein [Candidatus Zixiibacteriota bacterium] diamond 462 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
27086697 27086697 PRJNA853194_S_NODE_45542_length_320_cov_2.469636_g44451_i0 PRJNA853194 45542 320 2.469636 7.9028352 Bacteroidota bacterium 1898104 Bacteria Bacteria 45.1 0.0118   NR MCA0389646.1 1898104 g44451 i0 29.5 0.825 88 59 80.6 2 274 17 113 199 MCA0389646.1 DUF4292 domain-containing protein [Bacteroidota bacterium] diamond 264 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27371374 27371374 PRJNA853194_S_NODE_35703_length_355_cov_1.567376_g34612_i0 PRJNA853194 35703 355 1.567376 5.5641848 Tenacibaculum agarivorans 1908389 Bacteria Bacteria 44.7 0.0207   NR WP_143569757.1 1908389 g34612 i0 33.1 1.09859154929577 130 55 90.4 7 12 332 116 236 WP_143569757.1 hypothetical protein [Tenacibaculum agarivorans] diamond 390 44.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Tenacibaculum Tenacibaculum agarivorans
27528927 27528927 PRJNA853194_S_NODE_10863_length_575_cov_4.836653_g9814_i0 PRJNA853194 10863 575 4.836653 27.81075475 Bacteroides 816 Bacteria Bacteria 47 0.0196   NR WP_224319383.1 816 g9814 i0 32.8 0.667826086956522 128 70 59.5 5 227 568 136 261 WP_224319383.1 MULTISPECIES: UDP-N-acetylmuramate dehydrogenase [Bacteroides] diamond 384 47 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides  
27592281 27592281 PRJNA853194_S_NODE_364_length_1934_cov_233.796346_g225_i1 PRJNA853194 364 1934 233.796346 4521.62133164 Chryseobacterium cucumeris 1813611 Bacteria Bacteria 49.3 0.0478   NR WP_062676161.1 1813611 g225 i1 27 0.350568769389866 226 113 34 10 929 1585 170 350 WP_062676161.1 hypothetical protein [Chryseobacterium cucumeris] diamond 678 49.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium cucumeris
27781677 27781677 PRJNA853194_S_NODE_5124_length_795_cov_4.168975_g4288_i0 PRJNA853194 5124 795 4.168975 33.14335125 Flavobacteriales bacterium 2021391 Bacteria Bacteria 49.3 0.0103   NR RYF19581.1 2021391 g4288 i0 27 0.9660377358490572 256 144 86.4 9 77 763 140 379 RYF19581.1 MAG: hypothetical protein EOO42_14125 [Flavobacteriales bacterium] diamond 768 49.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
27813384 27813384 PRJNA853194_S_NODE_7784_length_665_cov_16.184122_g6801_i0 PRJNA853194 7784 665 16.184122 107.6244113 Bacteroidota bacterium 1898104 Bacteria Bacteria 132 6.37e-33   NR RMH53848.1 1898104 g6801 i0 40.4 3.48721804511278 146 84 65.4 2 25 459 225 368 RMH53848.1 MAG: GTP 3',8-cyclase MoaA [Bacteroidota bacterium] diamond 2319 132 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28318298 28318298 PRJNA853194_S_NODE_79866_length_247_cov_1.327586_g78775_i0 PRJNA853194 79866 247 1.327586 3.27913742 Bacteroides eggerthii 28111 Bacteria Bacteria 43.9 0.0153   NR WP_004294264.1 28111 g78775 i0 35.7 1.7004048582996 70 43 83.8 2 243 37 52 120 WP_004294264.1 sulfatase [Bacteroides eggerthii] diamond 420 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides eggerthii
28570809 28570809 PRJNA853194_S_NODE_24347_length_414_cov_13.466276_g23256_i0 PRJNA853194 24347 414 13.466276 55.75038264 Sphingobacterium bovistauri 2781959 Bacteria Bacteria 46.2 0.0138   NR WP_225552148.1 2781959 g23256 i0 30.7 0.543478260869565 75 51 54.3 1 326 102 13 86 WP_225552148.1 TonB-dependent receptor [Sphingobacterium bovistauri] diamond 225 46.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium bovistauri
28665755 28665755 PRJNA853194_S_NODE_67047_length_268_cov_1.579487_g65956_i0 PRJNA853194 67047 268 1.579487 4.23302516 Prevotella sp. 59823 Bacteria Bacteria 42.7 0.0462   NR MBR3089822.1 59823 g65956 i0 41.5 0.593283582089552 53 31 59.3 0 197 39 13 65 MBR3089822.1 transposase [Prevotella sp.] diamond 159 42.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella sp.
28728809 28728809 PRJNA853194_S_NODE_29687_length_383_cov_1.667742_g28596_i0 PRJNA853194 29687 383 1.667742 6.38745186 Parabacteroides gordonii 574930 Bacteria Bacteria 44.3 0.05   NR WP_028728217.1 574930 g28596 i0 40.4 0.446475195822454 57 34 44.6 0 81 251 667 723 WP_028728217.1 hypothetical protein [Parabacteroides gordonii] diamond 171 44.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Parabacteroides Parabacteroides gordonii
28823225 28823225 PRJNA853194_S_NODE_4148_length_865_cov_16.655303_g3381_i0 PRJNA853194 4148 865 16.655303 144.06837095 Chryseobacterium lacus 2058346 Bacteria Bacteria 60.8 1.85e-6   NR WP_114302830.1 2058346 g3381 i0 50 0.228901734104046 66 32 22.5 1 578 384 36 101 WP_114302830.1 proline dehydrogenase family protein [Chryseobacterium lacus] diamond 198 60.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium lacus
29044690 29044690 PRJNA853194_S_NODE_42568_length_330_cov_1.276265_g41477_i0 PRJNA853194 42568 330 1.276265 4.2116745 Bacteroidetes bacterium ADurb.Bin234 1852810 Bacteria Bacteria 45.1 0.015   NR OQA92910.1 1852810 g41477 i0 30.5 0.745454545454545 82 54 72.7 2 44 283 409 489 OQA92910.1 MAG: hypothetical protein BWY27_00095 [Bacteroidetes bacterium ADurb.Bin234] diamond 246 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidetes bacterium ADurb.Bin234
29580968 29580968 PRJNA853194_S_NODE_8750_length_631_cov_9.978495_g7737_i0 PRJNA853194 8750 631 9.978495 62.96430345 Bacteroidota bacterium 1898104 Bacteria Bacteria 50.8 0.00169   NR MEN9448333.1 1898104 g7737 i0 32 0.580031695721078 122 78 57.1 4 533 174 203 321 MEN9448333.1 ribonuclease [Bacteroidota bacterium] diamond 366 50.8 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
29991866 29991866 PRJNA853194_S_NODE_22351_length_428_cov_3.492958_g21260_i0 PRJNA853194 22351 428 3.492958 14.94986024 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 47 0.00866   NR MDA8588908.1 1871037 g21260 i0 32.5 0.841121495327103 120 59 70.8 6 371 69 633 749 MDA8588908.1 PD-(D/E)XK nuclease family protein [Flavobacteriaceae bacterium] diamond 360 47 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
30023613 30023613 PRJNA853194_S_NODE_27551_length_394_cov_2.850467_g26460_i0 PRJNA853194 27551 394 2.850467 11.23083998 Bacteroidota bacterium 1898104 Bacteria Bacteria 45.4 0.0216   NR MDB5227346.1 1898104 g26460 i0 31.1 0.784263959390863 103 62 72.3 2 81 365 93 194 MDB5227346.1 putative ATP-binding protein involved in virulence [Bacteroidota bacterium] diamond 309 45.4 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30276505 30276505 PRJNA853194_S_NODE_56732_length_290_cov_1.520737_g55641_i0 PRJNA853194 56732 290 1.520737 4.4101373 Spirosoma pollinicola 2057025 Bacteria Bacteria 43.9 0.0262   NR WP_100989782.1 2057025 g55641 i0 27.1 0.993103448275862 96 53 89 3 282 25 184 272 WP_100989782.1 DEAD/DEAH box helicase [Spirosoma pollinicola] diamond 288 43.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Spirosoma Spirosoma pollinicola
30528865 30528865 PRJNA853194_S_NODE_5113_length_796_cov_3.372061_g4278_i0 PRJNA853194 5113 796 3.372061 26.84160556 Candidatus Karelsulcia muelleri 336810 Bacteria Bacteria 48.1 0.00769   NR WP_348660600.1 336810 g4278 i0 32.9 0.561557788944724 149 78 54.3 7 60 491 4 135 WP_348660600.1 F0F1 ATP synthase subunit delta [Candidatus Karelsulcia muelleri] diamond 447 48.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales   Candidatus Karelsulcia Candidatus Karelsulcia muelleri
31793170 31793170 PRJNA853194_S_NODE_6417_length_724_cov_1258.970814_g5501_i0 PRJNA853194 6417 724 1258.970814 9114.94869336 Candidatus Aegiribacteria sp. 2528271 Bacteria Bacteria 94.7 3.44e-21   NR MFO8183585.1 2528271 g5501 i0 57.7 1.01519337016575 78 33 32.3 0 674 441 2 79 MFO8183585.1 RNA-binding protein [Candidatus Aegiribacteria sp.] diamond 735 94.7 1 Bacteria FCB group Pseudomonadati         Candidatus Aegiribacteria Candidatus Aegiribacteria sp.
31951524 31951524 PRJNA853194_S_NODE_8737_length_631_cov_150.365591_g7725_i0 PRJNA853194 8737 631 150.365591 948.80687921 Lacibacter sp. 1915409 Bacteria Bacteria 47 0.0172   NR WP_324232586.1 1915409 g7725 i0 31.9 0.446909667194929 94 63 44.2 1 93 371 3 96 WP_324232586.1 hypothetical protein [Lacibacter sp.] diamond 282 47 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Lacibacter Lacibacter sp.
32394624 32394624 PRJNA853194_S_NODE_41299_length_334_cov_2.371648_g40208_i0 PRJNA853194 41299 334 2.371648 7.92130432 Rosettibacter primus 3111523 Bacteria Bacteria 43.9 0.0387   NR WP_353675908.1 3111523 g40208 i0 36.6 0.637724550898204 71 42 61.1 2 265 62 243 313 WP_353675908.1 GWxTD domain-containing protein [Rosettibacter primus] diamond 213 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Rosettibacter Rosettibacter primus
32426246 32426246 PRJNA853194_S_NODE_55699_length_292_cov_3.593607_g54608_i0 PRJNA853194 55699 292 3.593607 10.49333244 Saprospiraceae bacterium 2202734 Bacteria Bacteria 45.8 0.00527   NR MCB0693351.1 2202734 g54608 i0 39.6 0.986301369863014 48 26 46.2 1 29 163 234 281 MCB0693351.1 hypothetical protein [Saprospiraceae bacterium] diamond 288 45.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;