RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA853194" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA853194 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26865465 26865465 PRJNA853194_S_NODE_8541_length_638_cov_4.713274_g7534_i0 PRJNA853194 8541 638 4.713274 30.07068812 Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_4 2026717 Bacteria Bacteria 47 0.0286   NR OGH92228.1 1798705 g7534 i0 33 0.456112852664577 97 54 40.9 3 201 461 61 156 OGH92228.1 MAG: hypothetical protein A2563_00090 [Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23] diamond 291 47 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFOXYD1_FULL_40_23
30054848 30054848 PRJNA853194_S_NODE_73671_length_256_cov_1.136612_g72580_i0 PRJNA853194 73671 256 1.136612 2.90972672 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 43.1 0.0294   NR MCK4554623.1 2762014 g72580 i0 30 1.546875 80 51 93.8 1 16 255 48 122 MCK4554623.1 ATP synthase F1 subunit gamma [Candidatus Parcubacteria bacterium] diamond 396 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30813259 30813259 PRJNA853194_S_NODE_57674_length_288_cov_1.227907_g56583_i0 PRJNA853194 57674 288 1.227907 3.53637216 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 43.5 0.0339   NR TEU07665.1 2052149 g56583 i0 29.8 0.875 84 56 85.4 2 17 262 123 205 TEU07665.1 MAG: hypothetical protein E3I52_03090 [Candidatus Aminicenantes bacterium] diamond 252 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31223866 31223866 PRJNA853194_S_NODE_4075_length_871_cov_2.625313_g3317_i0 PRJNA853194 4075 871 2.625313 22.86647623 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 55.1 2.01e-4   NR MCX6752963.1 2052152 g3317 i0 32.7 0.378874856486797 110 70 37.2 2 548 871 101 208 MCX6752963.1 ribonuclease R [Candidatus Nomurabacteria bacterium] diamond 330 55.1 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;