RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA851399" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA851399 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29360289 29360289 PRJNA851399_P_NODE_22469_length_172_cov_1.390244_g22016_i0 PRJNA851399 22469 172 1.390244 2.39121968 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 98.2 3.81e-22   NR MFA7482165.1 3107663 g22016 i0 82.5 1.98837209302326 57 10 99.4 0 2 172 415 471 MFA7482165.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein [Vulcanimicrobiota bacterium] diamond 342 98.2 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32646880 32646880 PRJNA851399_P_NODE_24160_length_168_cov_2.100840_g23707_i0 PRJNA851399 24160 168 2.10084 3.5294112 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 65.1 1.77e-10   NR MFA5508691.1 3107663 g23707 i0 61.1 1.91071428571429 54 21 96.4 0 168 7 96 149 MFA5508691.1 transposase [Vulcanimicrobiota bacterium] diamond 321 65.1 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;